Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Gm37179-201ENSMUST00000194862 823 ntBASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43aQ3TL54 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43aQ3TL54 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43aQ3TL54 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Trim43aQ3TL54 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43aQ3TL54 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43aQ3TL54 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Nespas-201ENSMUST00000143738 1083 ntBASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43aQ3TL54 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms