Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.9■□□□□ 0.46
Thumpd3P97770 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Thumpd3P97770 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.9■□□□□ 0.46
Thumpd3P97770 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.9■□□□□ 0.46
Thumpd3P97770 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.9■□□□□ 0.46
Thumpd3P97770 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd3P97770 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Thumpd3P97770 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Thumpd3P97770 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.89■□□□□ 0.45
Thumpd3P97770 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Thumpd3P97770 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Thumpd3P97770 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Thumpd3P97770 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Thumpd3P97770 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Thumpd3P97770 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd3P97770 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.88■□□□□ 0.45
Thumpd3P97770 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Thumpd3P97770 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Thumpd3P97770 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Thumpd3P97770 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.88■□□□□ 0.45
Thumpd3P97770 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd3P97770 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Thumpd3P97770 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Thumpd3P97770 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd3P97770 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.86■□□□□ 0.45
Thumpd3P97770 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Thumpd3P97770 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Thumpd3P97770 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Thumpd3P97770 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Thumpd3P97770 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd3P97770 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Thumpd3P97770 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms