Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC26.06■■□□□ 1.76
NclP09405 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC26.06■■□□□ 1.76
NclP09405 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC26.06■■□□□ 1.76
NclP09405 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
NclP09405 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
NclP09405 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NclP09405 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
NclP09405 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Gm18959-201ENSMUST00000208954 655 ntBASIC26.05■■□□□ 1.76
NclP09405 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
NclP09405 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NclP09405 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NclP09405 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NclP09405 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NclP09405 Gm24841-201ENSMUST00000158676 357 ntBASIC26.04■■□□□ 1.76
NclP09405 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NclP09405 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
NclP09405 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NclP09405 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
NclP09405 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NclP09405 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
NclP09405 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC26.03■■□□□ 1.76
NclP09405 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC26.03■■□□□ 1.76
NclP09405 AC130671.1-201ENSMUST00000227384 1237 ntBASIC26.03■■□□□ 1.76
NclP09405 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
NclP09405 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
NclP09405 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
NclP09405 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NclP09405 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
NclP09405 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC26.02■■□□□ 1.76
NclP09405 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC26.02■■□□□ 1.76
NclP09405 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
NclP09405 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NclP09405 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NclP09405 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC26.01■■□□□ 1.75
NclP09405 Gm37374-201ENSMUST00000194954 1829 ntBASIC26.01■■□□□ 1.75
NclP09405 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
NclP09405 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NclP09405 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NclP09405 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NclP09405 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
NclP09405 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
NclP09405 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC26■■□□□ 1.75
NclP09405 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Gm2274-201ENSMUST00000184539 609 ntBASIC26■■□□□ 1.75
NclP09405 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC26■■□□□ 1.75
NclP09405 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC26■■□□□ 1.75
NclP09405 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
NclP09405 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms