Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn5Q9JL35 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hmgn5Q9JL35 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.89■□□□□ 0.78
Hmgn5Q9JL35 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmgn5Q9JL35 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Gm40848-201ENSMUST00000221998 324 ntBASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn5Q9JL35 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn5Q9JL35 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Gm26833-201ENSMUST00000180899 440 ntBASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgn5Q9JL35 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hmgn5Q9JL35 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn5Q9JL35 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms