Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Upb1Q8VC97 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Idnk-204ENSMUST00000226010 1898 ntBASIC19.16■□□□□ 0.66
Upb1Q8VC97 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.16■□□□□ 0.66
Upb1Q8VC97 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upb1Q8VC97 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Gm13836-201ENSMUST00000121159 501 ntBASIC19.15■□□□□ 0.66
Upb1Q8VC97 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upb1Q8VC97 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Upb1Q8VC97 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Upb1Q8VC97 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Upb1Q8VC97 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Gm6433-201ENSMUST00000118634 875 ntBASIC19.14■□□□□ 0.65
Upb1Q8VC97 Gm24841-201ENSMUST00000158676 357 ntBASIC19.14■□□□□ 0.65
Upb1Q8VC97 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.14■□□□□ 0.65
Upb1Q8VC97 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upb1Q8VC97 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.13■□□□□ 0.65
Upb1Q8VC97 Gm11539-201ENSMUST00000119837 557 ntBASIC19.13■□□□□ 0.65
Upb1Q8VC97 Gm13436-201ENSMUST00000120418 567 ntBASIC19.13■□□□□ 0.65
Upb1Q8VC97 Gm27463-201ENSMUST00000183569 57 ntBASIC19.13■□□□□ 0.65
Upb1Q8VC97 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.13■□□□□ 0.65
Upb1Q8VC97 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.13■□□□□ 0.65
Upb1Q8VC97 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upb1Q8VC97 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Gm13559-201ENSMUST00000120476 863 ntBASIC19.12■□□□□ 0.65
Upb1Q8VC97 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upb1Q8VC97 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms