Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrif1Q8CDD9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrif1Q8CDD9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.42■□□□□ 0.38
Lrif1Q8CDD9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lrif1Q8CDD9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms