Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brf2Q3UAW9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.61■□□□□ 0.25
Brf2Q3UAW9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brf2Q3UAW9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.6■□□□□ 0.25
Brf2Q3UAW9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brf2Q3UAW9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms