Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43aQ3TL54 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43aQ3TL54 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43aQ3TL54 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim43aQ3TL54 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43aQ3TL54 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trim43aQ3TL54 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43aQ3TL54 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms