Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.74■□□□□ 0.43
Pfdn6Q03958 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.73■□□□□ 0.43
Pfdn6Q03958 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn6Q03958 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.72■□□□□ 0.43
Pfdn6Q03958 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn6Q03958 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Gm10418-201ENSMUST00000100943 576 ntBASIC17.71■□□□□ 0.43
Pfdn6Q03958 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Gm8969-201ENSMUST00000199694 526 ntBASIC17.71■□□□□ 0.43
Pfdn6Q03958 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.71■□□□□ 0.43
Pfdn6Q03958 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pfdn6Q03958 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.71■□□□□ 0.43
Pfdn6Q03958 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn6Q03958 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Pfdn6Q03958 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pfdn6Q03958 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.7■□□□□ 0.42
Pfdn6Q03958 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Gm2559-201ENSMUST00000201323 363 ntBASIC17.7■□□□□ 0.42
Pfdn6Q03958 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn6Q03958 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.69■□□□□ 0.42
Pfdn6Q03958 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.69■□□□□ 0.42
Pfdn6Q03958 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pfdn6Q03958 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms