Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Gm12085-201ENSMUST00000119263 940 ntBASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rsph3bQ9DA80 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Gm11539-201ENSMUST00000119837 557 ntBASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Gm13436-201ENSMUST00000120418 567 ntBASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rsph3bQ9DA80 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Tgds-204ENSMUST00000228543 1594 ntBASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rsph3bQ9DA80 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Gm13559-201ENSMUST00000120476 863 ntBASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rsph3bQ9DA80 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rsph3bQ9DA80 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rsph3bQ9DA80 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms