Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Gm12382-201ENSMUST00000122005 922 ntBASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Gm43183-201ENSMUST00000200632 547 ntBASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb2Q91Y00 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Mir2861-201ENSMUST00000175539 82 ntBASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb2Q91Y00 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb2Q91Y00 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb2Q91Y00 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Fst-202ENSMUST00000223640 2612 ntBASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Gm10418-201ENSMUST00000100943 576 ntBASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb2Q91Y00 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb2Q91Y00 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb2Q91Y00 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhb2Q91Y00 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb2Q91Y00 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Mir1199-201ENSMUST00000117015 119 ntBASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Gm37292-201ENSMUST00000192062 758 ntBASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb2Q91Y00 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb2Q91Y00 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb2Q91Y00 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb2Q91Y00 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms