Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrif1Q8CDD9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrif1Q8CDD9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrif1Q8CDD9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.47■□□□□ 0.39
Lrif1Q8CDD9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrif1Q8CDD9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.46■□□□□ 0.38
Lrif1Q8CDD9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lrif1Q8CDD9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lrif1Q8CDD9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 176.7 ms