Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Znf235Q61116 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Znf235Q61116 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Znf235Q61116 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.59■□□□□ 0.57
Znf235Q61116 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Znf235Q61116 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Znf235Q61116 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Znf235Q61116 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Znf235Q61116 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Znf235Q61116 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.58■□□□□ 0.57
Znf235Q61116 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Znf235Q61116 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Znf235Q61116 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.58■□□□□ 0.56
Znf235Q61116 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Znf235Q61116 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.58■□□□□ 0.56
Znf235Q61116 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Znf235Q61116 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Znf235Q61116 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Znf235Q61116 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.57■□□□□ 0.56
Znf235Q61116 Gm7791-201ENSMUST00000219066 539 ntBASIC18.57■□□□□ 0.56
Znf235Q61116 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Znf235Q61116 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Znf235Q61116 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Znf235Q61116 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Znf235Q61116 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.56■□□□□ 0.56
Znf235Q61116 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.56■□□□□ 0.56
Znf235Q61116 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.56■□□□□ 0.56
Znf235Q61116 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Znf235Q61116 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Znf235Q61116 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.56■□□□□ 0.56
Znf235Q61116 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Znf235Q61116 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Znf235Q61116 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Znf235Q61116 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.56■□□□□ 0.56
Znf235Q61116 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Znf235Q61116 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.56■□□□□ 0.56
Znf235Q61116 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Znf235Q61116 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Znf235Q61116 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Znf235Q61116 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Znf235Q61116 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Znf235Q61116 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Znf235Q61116 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Znf235Q61116 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Znf235Q61116 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.54■□□□□ 0.56
Znf235Q61116 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Znf235Q61116 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Znf235Q61116 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Znf235Q61116 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Znf235Q61116 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.53■□□□□ 0.56
Znf235Q61116 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.53■□□□□ 0.56
Znf235Q61116 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Gm45058-201ENSMUST00000205810 766 ntBASIC18.53■□□□□ 0.56
Znf235Q61116 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Znf235Q61116 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.53■□□□□ 0.56
Znf235Q61116 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Znf235Q61116 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Znf235Q61116 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Znf235Q61116 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Znf235Q61116 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Znf235Q61116 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Znf235Q61116 Gm18959-201ENSMUST00000208954 655 ntBASIC18.52■□□□□ 0.56
Znf235Q61116 Gm18032-201ENSMUST00000222541 538 ntBASIC18.52■□□□□ 0.56
Znf235Q61116 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Znf235Q61116 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Znf235Q61116 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.52■□□□□ 0.56
Znf235Q61116 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Znf235Q61116 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms