Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NclP09405 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NclP09405 Gm4974-201ENSMUST00000209974 875 ntBASIC26.24■■□□□ 1.79
NclP09405 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NclP09405 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
NclP09405 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NclP09405 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NclP09405 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC26.23■■□□□ 1.79
NclP09405 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC26.23■■□□□ 1.79
NclP09405 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NclP09405 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NclP09405 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
NclP09405 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NclP09405 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NclP09405 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
NclP09405 Dmtn-210ENSMUST00000228824 2377 ntBASIC26.22■■□□□ 1.79
NclP09405 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC26.22■■□□□ 1.79
NclP09405 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC26.22■■□□□ 1.79
NclP09405 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
NclP09405 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC26.22■■□□□ 1.79
NclP09405 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NclP09405 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NclP09405 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NclP09405 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NclP09405 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NclP09405 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC26.21■■□□□ 1.79
NclP09405 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NclP09405 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NclP09405 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
NclP09405 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
NclP09405 Fam105a-203ENSMUST00000226170 3043 ntBASIC26.2■■□□□ 1.79
NclP09405 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
NclP09405 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NclP09405 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
NclP09405 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NclP09405 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
NclP09405 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NclP09405 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NclP09405 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NclP09405 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
NclP09405 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NclP09405 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NclP09405 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
NclP09405 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
NclP09405 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NclP09405 Gm7889-201ENSMUST00000185591 958 ntBASIC26.19■■□□□ 1.78
NclP09405 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC26.19■■□□□ 1.78
NclP09405 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC26.19■■□□□ 1.78
NclP09405 Gm38027-201ENSMUST00000192315 235 ntBASIC26.19■■□□□ 1.78
NclP09405 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC26.19■■□□□ 1.78
NclP09405 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NclP09405 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NclP09405 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NclP09405 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NclP09405 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC26.18■■□□□ 1.78
NclP09405 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NclP09405 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
NclP09405 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC26.18■■□□□ 1.78
NclP09405 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC26.18■■□□□ 1.78
NclP09405 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC26.18■■□□□ 1.78
NclP09405 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NclP09405 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NclP09405 Gm37820-201ENSMUST00000194021 2147 ntBASIC26.18■■□□□ 1.78
NclP09405 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Gm27463-201ENSMUST00000183569 57 ntBASIC26.17■■□□□ 1.78
NclP09405 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
NclP09405 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NclP09405 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
NclP09405 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NclP09405 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
NclP09405 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NclP09405 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NclP09405 Gm29791-202ENSMUST00000207888 369 ntBASIC26.15■■□□□ 1.78
NclP09405 AC159205.6-201ENSMUST00000224935 887 ntBASIC26.15■■□□□ 1.78
NclP09405 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NclP09405 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
NclP09405 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NclP09405 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms