Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11236J3QMS7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Gm25016-201ENSMUST00000158399 131 ntBASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Gm33142-201ENSMUST00000193913 867 ntBASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Gm7370-201ENSMUST00000219471 767 ntBASIC18.54■□□□□ 0.56
Gm11236J3QMS7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11236J3QMS7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Gm10819-201ENSMUST00000099988 561 ntBASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11236J3QMS7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Mir1668-201ENSMUST00000184114 107 ntBASIC18.52■□□□□ 0.56
Gm11236J3QMS7 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.52■□□□□ 0.56
Gm11236J3QMS7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm11236J3QMS7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11236J3QMS7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.5■□□□□ 0.55
Gm11236J3QMS7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11236J3QMS7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms