Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.72■□□□□ 0.11
Trav10A0A075B642 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Mtag2-201ENSMUST00000058665 714 ntBASIC15.72■□□□□ 0.11
Trav10A0A075B642 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav10A0A075B642 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Gm12441-201ENSMUST00000121806 588 ntBASIC15.71■□□□□ 0.11
Trav10A0A075B642 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav10A0A075B642 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav10A0A075B642 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.71■□□□□ 0.1
Trav10A0A075B642 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trav10A0A075B642 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.7■□□□□ 0.1
Trav10A0A075B642 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav10A0A075B642 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.69■□□□□ 0.1
Trav10A0A075B642 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav10A0A075B642 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Dio3-201ENSMUST00000097228 1449 ntBASIC15.68■□□□□ 0.1
Trav10A0A075B642 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav10A0A075B642 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.68■□□□□ 0.1
Trav10A0A075B642 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms