Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn5Q9JL35 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Hmgn5Q9JL35 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmgn5Q9JL35 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmgn5Q9JL35 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Mir7075-201ENSMUST00000184187 82 ntBASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn5Q9JL35 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Idnk-204ENSMUST00000226010 1898 ntBASIC20■□□□□ 0.79
Hmgn5Q9JL35 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn5Q9JL35 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Gm43173-201ENSMUST00000202246 593 ntBASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn5Q9JL35 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.98■□□□□ 0.79
Hmgn5Q9JL35 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn5Q9JL35 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn5Q9JL35 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Hmgn5Q9JL35 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms