Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco4Q9JIS3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco4Q9JIS3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smco4Q9JIS3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Smco4Q9JIS3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smco4Q9JIS3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smco4Q9JIS3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smco4Q9JIS3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco4Q9JIS3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco4Q9JIS3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Gm14523-201ENSMUST00000117260 558 ntBASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Gm7143-201ENSMUST00000222811 859 ntBASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smco4Q9JIS3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms