Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Odf3b-204ENSMUST00000227834 930 ntBASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rsph3bQ9DA80 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rsph3bQ9DA80 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Gm6433-201ENSMUST00000118634 875 ntBASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Gm11643-201ENSMUST00000119578 864 ntBASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rsph3bQ9DA80 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rsph3bQ9DA80 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rsph3bQ9DA80 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rsph3bQ9DA80 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rsph3bQ9DA80 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
Rsph3bQ9DA80 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rsph3bQ9DA80 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Gm3375-201ENSMUST00000203929 796 ntBASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.41■□□□□ 0.7
Rsph3bQ9DA80 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rsph3bQ9DA80 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rsph3bQ9DA80 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rsph3bQ9DA80 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rsph3bQ9DA80 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Rsph3bQ9DA80 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Gm10517-202ENSMUST00000192970 758 ntBASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rsph3bQ9DA80 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms