Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC21.27■□□□□ 0.99
Mre11Q61216 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
Mre11Q61216 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Mre11Q61216 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mre11Q61216 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mre11Q61216 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.26■□□□□ 0.99
Mre11Q61216 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Mre11Q61216 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.26■□□□□ 0.99
Mre11Q61216 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.26■□□□□ 0.99
Mre11Q61216 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.26■□□□□ 0.99
Mre11Q61216 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mre11Q61216 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mre11Q61216 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.25■□□□□ 0.99
Mre11Q61216 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Mre11Q61216 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.25■□□□□ 0.99
Mre11Q61216 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Mre11Q61216 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.25■□□□□ 0.99
Mre11Q61216 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Mre11Q61216 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mre11Q61216 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.24■□□□□ 0.99
Mre11Q61216 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.24■□□□□ 0.99
Mre11Q61216 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Mre11Q61216 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.24■□□□□ 0.99
Mre11Q61216 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mre11Q61216 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Spcs1-204ENSMUST00000226782 949 ntBASIC21.23■□□□□ 0.99
Mre11Q61216 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.23■□□□□ 0.99
Mre11Q61216 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mre11Q61216 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.22■□□□□ 0.99
Mre11Q61216 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.22■□□□□ 0.99
Mre11Q61216 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.22■□□□□ 0.99
Mre11Q61216 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mre11Q61216 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Mre11Q61216 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Mre11Q61216 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Mre11Q61216 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Mre11Q61216 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms