Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rufy4Q3TYX8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rufy4Q3TYX8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rufy4Q3TYX8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Gm10517-202ENSMUST00000192970 758 ntBASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Grk6-206ENSMUST00000224995 2971 ntBASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rufy4Q3TYX8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Gm3375-201ENSMUST00000203929 796 ntBASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rufy4Q3TYX8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Gm11643-201ENSMUST00000119578 864 ntBASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rufy4Q3TYX8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Rufy4Q3TYX8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rufy4Q3TYX8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rufy4Q3TYX8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rufy4Q3TYX8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rufy4Q3TYX8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rufy4Q3TYX8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Gm12085-201ENSMUST00000119263 940 ntBASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rufy4Q3TYX8 Gm43799-201ENSMUST00000201845 579 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms