Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Gm37179-201ENSMUST00000194862 823 ntBASIC17.84■□□□□ 0.45
Pfdn6Q03958 Gm44549-201ENSMUST00000208351 577 ntBASIC17.84■□□□□ 0.45
Pfdn6Q03958 Rab3c-203ENSMUST00000224180 967 ntBASIC17.84■□□□□ 0.45
Pfdn6Q03958 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn6Q03958 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn6Q03958 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.83■□□□□ 0.44
Pfdn6Q03958 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.83■□□□□ 0.44
Pfdn6Q03958 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn6Q03958 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.82■□□□□ 0.44
Pfdn6Q03958 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.82■□□□□ 0.44
Pfdn6Q03958 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Flg-201ENSMUST00000050758 1488 ntBASIC17.82■□□□□ 0.44
Pfdn6Q03958 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn6Q03958 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Gm26524-201ENSMUST00000192339 390 ntBASIC17.81■□□□□ 0.44
Pfdn6Q03958 Gm5408-201ENSMUST00000197998 747 ntBASIC17.81■□□□□ 0.44
Pfdn6Q03958 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Gm10602-201ENSMUST00000098239 609 ntBASIC17.81■□□□□ 0.44
Pfdn6Q03958 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Fst-202ENSMUST00000223640 2612 ntBASIC17.81■□□□□ 0.44
Pfdn6Q03958 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn6Q03958 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn6Q03958 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms