Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1aP97445 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1aP97445 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1aP97445 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cacna1aP97445 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.35■□□□□ 0.21
Cacna1aP97445 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cacna1aP97445 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cacna1aP97445 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Gm9013-201ENSMUST00000132939 882 ntBASIC16.35■□□□□ 0.21
Cacna1aP97445 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.35■□□□□ 0.21
Cacna1aP97445 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1aP97445 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.34■□□□□ 0.21
Cacna1aP97445 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Gm27704-201ENSMUST00000185094 107 ntBASIC16.34■□□□□ 0.21
Cacna1aP97445 Gm7063-201ENSMUST00000186840 981 ntBASIC16.34■□□□□ 0.21
Cacna1aP97445 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cacna1aP97445 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.34■□□□□ 0.21
Cacna1aP97445 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1aP97445 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.33■□□□□ 0.21
Cacna1aP97445 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1aP97445 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1aP97445 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1aP97445 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.33■□□□□ 0.21
Cacna1aP97445 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1aP97445 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1aP97445 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cacna1aP97445 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.33■□□□□ 0.2
Cacna1aP97445 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Cacna1aP97445 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1aP97445 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cacna1aP97445 Gm37935-201ENSMUST00000192012 982 ntBASIC16.33■□□□□ 0.2
Cacna1aP97445 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.33■□□□□ 0.2
Cacna1aP97445 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.32■□□□□ 0.2
Cacna1aP97445 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.32■□□□□ 0.2
Cacna1aP97445 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.32■□□□□ 0.2
Cacna1aP97445 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cacna1aP97445 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1aP97445 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.31■□□□□ 0.2
Cacna1aP97445 Gm18669-201ENSMUST00000216049 778 ntBASIC16.31■□□□□ 0.2
Cacna1aP97445 Gm7791-201ENSMUST00000219066 539 ntBASIC16.31■□□□□ 0.2
Cacna1aP97445 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.31■□□□□ 0.2
Cacna1aP97445 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.31■□□□□ 0.2
Cacna1aP97445 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cacna1aP97445 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.31■□□□□ 0.2
Cacna1aP97445 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cacna1aP97445 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1aP97445 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1aP97445 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1aP97445 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1aP97445 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms