Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NclP09405 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
NclP09405 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC26.33■■□□□ 1.81
NclP09405 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC26.33■■□□□ 1.81
NclP09405 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC26.33■■□□□ 1.81
NclP09405 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NclP09405 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NclP09405 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
NclP09405 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC26.32■■□□□ 1.8
NclP09405 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC26.32■■□□□ 1.8
NclP09405 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
NclP09405 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NclP09405 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
NclP09405 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NclP09405 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NclP09405 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC26.31■■□□□ 1.8
NclP09405 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC26.31■■□□□ 1.8
NclP09405 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NclP09405 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NclP09405 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NclP09405 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NclP09405 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NclP09405 Gm8668-201ENSMUST00000120559 1447 ntBASIC26.31■■□□□ 1.8
NclP09405 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NclP09405 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
NclP09405 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC26.3■■□□□ 1.8
NclP09405 Gm11539-201ENSMUST00000119837 557 ntBASIC26.3■■□□□ 1.8
NclP09405 Gm13436-201ENSMUST00000120418 567 ntBASIC26.3■■□□□ 1.8
NclP09405 Gm13559-201ENSMUST00000120476 863 ntBASIC26.3■■□□□ 1.8
NclP09405 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
NclP09405 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
NclP09405 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NclP09405 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC26.29■■□□□ 1.8
NclP09405 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
NclP09405 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
NclP09405 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC26.29■■□□□ 1.8
NclP09405 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NclP09405 Gm43213-201ENSMUST00000151866 1790 ntBASIC26.28■■□□□ 1.8
NclP09405 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NclP09405 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NclP09405 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NclP09405 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NclP09405 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NclP09405 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NclP09405 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NclP09405 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Gm10418-201ENSMUST00000100943 576 ntBASIC26.27■■□□□ 1.8
NclP09405 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Gm12085-201ENSMUST00000119263 940 ntBASIC26.27■■□□□ 1.8
NclP09405 Gm10231-201ENSMUST00000181584 441 ntBASIC26.27■■□□□ 1.8
NclP09405 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Gm10175-202ENSMUST00000208752 441 ntBASIC26.27■■□□□ 1.8
NclP09405 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NclP09405 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NclP09405 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NclP09405 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NclP09405 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NclP09405 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC26.26■■□□□ 1.79
NclP09405 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
NclP09405 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC26.25■■□□□ 1.79
NclP09405 Gm9694-201ENSMUST00000193347 1189 ntBASIC26.25■■□□□ 1.79
NclP09405 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NclP09405 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NclP09405 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NclP09405 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NclP09405 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NclP09405 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NclP09405 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NclP09405 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC26.25■■□□□ 1.79
NclP09405 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms