Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Smarcb1Q9Z0H3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Smarcb1Q9Z0H3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.66■■□□□ 1.7
Smarcb1Q9Z0H3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smarcb1Q9Z0H3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Smarcb1Q9Z0H3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Smarcb1Q9Z0H3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Smarcb1Q9Z0H3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Smarcb1Q9Z0H3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Smarcb1Q9Z0H3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smarcb1Q9Z0H3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Smarcb1Q9Z0H3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Smarcb1Q9Z0H3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.6■■□□□ 1.69
Smarcb1Q9Z0H3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.59■■□□□ 1.69
Smarcb1Q9Z0H3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.59■■□□□ 1.69
Smarcb1Q9Z0H3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smarcb1Q9Z0H3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Smarcb1Q9Z0H3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Smarcb1Q9Z0H3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.57■■□□□ 1.68
Smarcb1Q9Z0H3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Smarcb1Q9Z0H3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smarcb1Q9Z0H3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
Smarcb1Q9Z0H3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smarcb1Q9Z0H3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smarcb1Q9Z0H3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Smarcb1Q9Z0H3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Smarcb1Q9Z0H3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.52■■□□□ 1.68
Smarcb1Q9Z0H3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Smarcb1Q9Z0H3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Smarcb1Q9Z0H3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smarcb1Q9Z0H3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smarcb1Q9Z0H3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smarcb1Q9Z0H3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smarcb1Q9Z0H3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smarcb1Q9Z0H3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smarcb1Q9Z0H3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.49■■□□□ 1.67
Smarcb1Q9Z0H3 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.49■■□□□ 1.67
Smarcb1Q9Z0H3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.49■■□□□ 1.67
Smarcb1Q9Z0H3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.48■■□□□ 1.67
Smarcb1Q9Z0H3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smarcb1Q9Z0H3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.48■■□□□ 1.67
Smarcb1Q9Z0H3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Smarcb1Q9Z0H3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Smarcb1Q9Z0H3 Gm7432-201ENSMUST00000210343 879 ntBASIC25.46■■□□□ 1.67
Smarcb1Q9Z0H3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Smarcb1Q9Z0H3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Smarcb1Q9Z0H3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Smarcb1Q9Z0H3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Smarcb1Q9Z0H3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.45■■□□□ 1.66
Smarcb1Q9Z0H3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Smarcb1Q9Z0H3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smarcb1Q9Z0H3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Smarcb1Q9Z0H3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Smarcb1Q9Z0H3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smarcb1Q9Z0H3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.42■■□□□ 1.66
Smarcb1Q9Z0H3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smarcb1Q9Z0H3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.42■■□□□ 1.66
Smarcb1Q9Z0H3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Smarcb1Q9Z0H3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Smarcb1Q9Z0H3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smarcb1Q9Z0H3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Smarcb1Q9Z0H3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smarcb1Q9Z0H3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Smarcb1Q9Z0H3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.39■■□□□ 1.65
Smarcb1Q9Z0H3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.39■■□□□ 1.65
Smarcb1Q9Z0H3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.37■■□□□ 1.65
Smarcb1Q9Z0H3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smarcb1Q9Z0H3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.37■■□□□ 1.65
Smarcb1Q9Z0H3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smarcb1Q9Z0H3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Smarcb1Q9Z0H3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Smarcb1Q9Z0H3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Smarcb1Q9Z0H3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Smarcb1Q9Z0H3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smarcb1Q9Z0H3 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.34■■□□□ 1.65
Smarcb1Q9Z0H3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.33■■□□□ 1.65
Smarcb1Q9Z0H3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Smarcb1Q9Z0H3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.33■■□□□ 1.65
Smarcb1Q9Z0H3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.32■■□□□ 1.64
Smarcb1Q9Z0H3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Smarcb1Q9Z0H3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Smarcb1Q9Z0H3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smarcb1Q9Z0H3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smarcb1Q9Z0H3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Smarcb1Q9Z0H3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.29■■□□□ 1.64
Smarcb1Q9Z0H3 Zxda-201ENSMUST00000117281 2621 ntBASIC25.28■■□□□ 1.64
Smarcb1Q9Z0H3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smarcb1Q9Z0H3 Gm11599-201ENSMUST00000118720 878 ntBASIC25.28■■□□□ 1.64
Smarcb1Q9Z0H3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.28■■□□□ 1.64
Smarcb1Q9Z0H3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
Smarcb1Q9Z0H3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smarcb1Q9Z0H3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smarcb1Q9Z0H3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smarcb1Q9Z0H3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Smarcb1Q9Z0H3 Gm30023-201ENSMUST00000197970 889 ntBASIC25.25■■□□□ 1.63
Smarcb1Q9Z0H3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.25■■□□□ 1.63
Smarcb1Q9Z0H3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smarcb1Q9Z0H3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smarcb1Q9Z0H3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smarcb1Q9Z0H3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms