Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nkx2-4Q9EQM3 Gm6311-201ENSMUST00000073790 878 ntBASIC25.85■■□□□ 1.73
Nkx2-4Q9EQM3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.83■■□□□ 1.73
Nkx2-4Q9EQM3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Nkx2-4Q9EQM3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-4Q9EQM3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nkx2-4Q9EQM3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Nkx2-4Q9EQM3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.8■■□□□ 1.72
Nkx2-4Q9EQM3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Nkx2-4Q9EQM3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Nkx2-4Q9EQM3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Nkx2-4Q9EQM3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Nkx2-4Q9EQM3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Nkx2-4Q9EQM3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.78■■□□□ 1.72
Nkx2-4Q9EQM3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Nkx2-4Q9EQM3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Nkx2-4Q9EQM3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Nkx2-4Q9EQM3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Nkx2-4Q9EQM3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Nkx2-4Q9EQM3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Nkx2-4Q9EQM3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.75■■□□□ 1.71
Nkx2-4Q9EQM3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Nkx2-4Q9EQM3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Nkx2-4Q9EQM3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Nkx2-4Q9EQM3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Nkx2-4Q9EQM3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.71■■□□□ 1.71
Nkx2-4Q9EQM3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Nkx2-4Q9EQM3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Nkx2-4Q9EQM3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.68■■□□□ 1.7
Nkx2-4Q9EQM3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.68■■□□□ 1.7
Nkx2-4Q9EQM3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Nkx2-4Q9EQM3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nkx2-4Q9EQM3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.67■■□□□ 1.7
Nkx2-4Q9EQM3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.67■■□□□ 1.7
Nkx2-4Q9EQM3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nkx2-4Q9EQM3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.66■■□□□ 1.7
Nkx2-4Q9EQM3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Nkx2-4Q9EQM3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Nkx2-4Q9EQM3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.65■■□□□ 1.7
Nkx2-4Q9EQM3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Nkx2-4Q9EQM3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Nkx2-4Q9EQM3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Nkx2-4Q9EQM3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.64■■□□□ 1.7
Nkx2-4Q9EQM3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Nkx2-4Q9EQM3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nkx2-4Q9EQM3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nkx2-4Q9EQM3 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.62■■□□□ 1.69
Nkx2-4Q9EQM3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Nkx2-4Q9EQM3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Nkx2-4Q9EQM3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.61■■□□□ 1.69
Nkx2-4Q9EQM3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.59■■□□□ 1.69
Nkx2-4Q9EQM3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Nkx2-4Q9EQM3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.58■■□□□ 1.69
Nkx2-4Q9EQM3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.56■■□□□ 1.68
Nkx2-4Q9EQM3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nkx2-4Q9EQM3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Nkx2-4Q9EQM3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nkx2-4Q9EQM3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Nkx2-4Q9EQM3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Nkx2-4Q9EQM3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Nkx2-4Q9EQM3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nkx2-4Q9EQM3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Nkx2-4Q9EQM3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Nkx2-4Q9EQM3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nkx2-4Q9EQM3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Nkx2-4Q9EQM3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Nkx2-4Q9EQM3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nkx2-4Q9EQM3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Nkx2-4Q9EQM3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Nkx2-4Q9EQM3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nkx2-4Q9EQM3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Nkx2-4Q9EQM3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Nkx2-4Q9EQM3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Nkx2-4Q9EQM3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Nkx2-4Q9EQM3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nkx2-4Q9EQM3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nkx2-4Q9EQM3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Nkx2-4Q9EQM3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nkx2-4Q9EQM3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Nkx2-4Q9EQM3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Nkx2-4Q9EQM3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nkx2-4Q9EQM3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nkx2-4Q9EQM3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Nkx2-4Q9EQM3 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.42■■□□□ 1.66
Nkx2-4Q9EQM3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Nkx2-4Q9EQM3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Nkx2-4Q9EQM3 Scarna2-201ENSMUST00000157560 414 ntBASIC25.41■■□□□ 1.66
Nkx2-4Q9EQM3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Nkx2-4Q9EQM3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nkx2-4Q9EQM3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nkx2-4Q9EQM3 Particl-201ENSMUST00000205370 1560 ntBASIC25.39■■□□□ 1.66
Nkx2-4Q9EQM3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Nkx2-4Q9EQM3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Nkx2-4Q9EQM3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Nkx2-4Q9EQM3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 Gm12366-201ENSMUST00000121722 873 ntBASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms