Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShpkQ9D5J6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ShpkQ9D5J6 Rab21-202ENSMUST00000218831 843 ntBASIC20.25■□□□□ 0.83
ShpkQ9D5J6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShpkQ9D5J6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShpkQ9D5J6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShpkQ9D5J6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShpkQ9D5J6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ShpkQ9D5J6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShpkQ9D5J6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.22■□□□□ 0.83
ShpkQ9D5J6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShpkQ9D5J6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShpkQ9D5J6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShpkQ9D5J6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShpkQ9D5J6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShpkQ9D5J6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
ShpkQ9D5J6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
ShpkQ9D5J6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShpkQ9D5J6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShpkQ9D5J6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShpkQ9D5J6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ShpkQ9D5J6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShpkQ9D5J6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShpkQ9D5J6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShpkQ9D5J6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShpkQ9D5J6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShpkQ9D5J6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ShpkQ9D5J6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.16■□□□□ 0.82
ShpkQ9D5J6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ShpkQ9D5J6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShpkQ9D5J6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShpkQ9D5J6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ShpkQ9D5J6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ShpkQ9D5J6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ShpkQ9D5J6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShpkQ9D5J6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ShpkQ9D5J6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShpkQ9D5J6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.13■□□□□ 0.81
ShpkQ9D5J6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
ShpkQ9D5J6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShpkQ9D5J6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShpkQ9D5J6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShpkQ9D5J6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ShpkQ9D5J6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShpkQ9D5J6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ShpkQ9D5J6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShpkQ9D5J6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShpkQ9D5J6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShpkQ9D5J6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.1■□□□□ 0.81
ShpkQ9D5J6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.1■□□□□ 0.81
ShpkQ9D5J6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ShpkQ9D5J6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShpkQ9D5J6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ShpkQ9D5J6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ShpkQ9D5J6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShpkQ9D5J6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.08■□□□□ 0.81
ShpkQ9D5J6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ShpkQ9D5J6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.08■□□□□ 0.8
ShpkQ9D5J6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShpkQ9D5J6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShpkQ9D5J6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ShpkQ9D5J6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.06■□□□□ 0.8
ShpkQ9D5J6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.06■□□□□ 0.8
ShpkQ9D5J6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ShpkQ9D5J6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShpkQ9D5J6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShpkQ9D5J6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ShpkQ9D5J6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShpkQ9D5J6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShpkQ9D5J6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShpkQ9D5J6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShpkQ9D5J6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShpkQ9D5J6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShpkQ9D5J6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
ShpkQ9D5J6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ShpkQ9D5J6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.03■□□□□ 0.8
ShpkQ9D5J6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShpkQ9D5J6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ShpkQ9D5J6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
ShpkQ9D5J6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShpkQ9D5J6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ShpkQ9D5J6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ShpkQ9D5J6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
ShpkQ9D5J6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ShpkQ9D5J6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ShpkQ9D5J6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShpkQ9D5J6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShpkQ9D5J6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms