Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx47Q9CWX9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx47Q9CWX9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx47Q9CWX9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx47Q9CWX9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx47Q9CWX9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx47Q9CWX9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.95■■□□□ 1.58
Ddx47Q9CWX9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx47Q9CWX9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.95■■□□□ 1.58
Ddx47Q9CWX9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Ddx47Q9CWX9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
Ddx47Q9CWX9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.93■■□□□ 1.58
Ddx47Q9CWX9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx47Q9CWX9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ddx47Q9CWX9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.92■■□□□ 1.58
Ddx47Q9CWX9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx47Q9CWX9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx47Q9CWX9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.91■■□□□ 1.58
Ddx47Q9CWX9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Ddx47Q9CWX9 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.9■■□□□ 1.58
Ddx47Q9CWX9 Gm27322-201ENSMUST00000184007 104 ntBASIC24.9■■□□□ 1.58
Ddx47Q9CWX9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx47Q9CWX9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx47Q9CWX9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Ddx47Q9CWX9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx47Q9CWX9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.89■■□□□ 1.57
Ddx47Q9CWX9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx47Q9CWX9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx47Q9CWX9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx47Q9CWX9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx47Q9CWX9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx47Q9CWX9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx47Q9CWX9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx47Q9CWX9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx47Q9CWX9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx47Q9CWX9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.84■■□□□ 1.57
Ddx47Q9CWX9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx47Q9CWX9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Ddx47Q9CWX9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ddx47Q9CWX9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx47Q9CWX9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx47Q9CWX9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx47Q9CWX9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx47Q9CWX9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Ddx47Q9CWX9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx47Q9CWX9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx47Q9CWX9 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.8■■□□□ 1.56
Ddx47Q9CWX9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx47Q9CWX9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Ddx47Q9CWX9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx47Q9CWX9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx47Q9CWX9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx47Q9CWX9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ddx47Q9CWX9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx47Q9CWX9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx47Q9CWX9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx47Q9CWX9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx47Q9CWX9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx47Q9CWX9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.73■■□□□ 1.55
Ddx47Q9CWX9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx47Q9CWX9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx47Q9CWX9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx47Q9CWX9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Ddx47Q9CWX9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx47Q9CWX9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx47Q9CWX9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.7■■□□□ 1.55
Ddx47Q9CWX9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ddx47Q9CWX9 Peli2-204ENSMUST00000226513 1320 ntBASIC24.7■■□□□ 1.54
Ddx47Q9CWX9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.69■■□□□ 1.54
Ddx47Q9CWX9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Ddx47Q9CWX9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.69■■□□□ 1.54
Ddx47Q9CWX9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx47Q9CWX9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx47Q9CWX9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx47Q9CWX9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.68■■□□□ 1.54
Ddx47Q9CWX9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Ddx47Q9CWX9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx47Q9CWX9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.64■■□□□ 1.53
Ddx47Q9CWX9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx47Q9CWX9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.63■■□□□ 1.53
Ddx47Q9CWX9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx47Q9CWX9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx47Q9CWX9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx47Q9CWX9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx47Q9CWX9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx47Q9CWX9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx47Q9CWX9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Ddx47Q9CWX9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx47Q9CWX9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx47Q9CWX9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx47Q9CWX9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx47Q9CWX9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx47Q9CWX9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx47Q9CWX9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms