Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
Pcdh15Q99PJ1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdh15Q99PJ1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdh15Q99PJ1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.1■■■□□ 2.25
Pcdh15Q99PJ1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Pcdh15Q99PJ1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdh15Q99PJ1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pcdh15Q99PJ1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pcdh15Q99PJ1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.06■■■□□ 2.24
Pcdh15Q99PJ1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.04■■■□□ 2.24
Pcdh15Q99PJ1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdh15Q99PJ1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.03■■■□□ 2.24
Pcdh15Q99PJ1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdh15Q99PJ1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.02■■■□□ 2.24
Pcdh15Q99PJ1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdh15Q99PJ1 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.01■■■□□ 2.23
Pcdh15Q99PJ1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
Pcdh15Q99PJ1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.99■■■□□ 2.23
Pcdh15Q99PJ1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Pcdh15Q99PJ1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.98■■■□□ 2.23
Pcdh15Q99PJ1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdh15Q99PJ1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pcdh15Q99PJ1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.95■■■□□ 2.23
Pcdh15Q99PJ1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pcdh15Q99PJ1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdh15Q99PJ1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdh15Q99PJ1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdh15Q99PJ1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.93■■■□□ 2.22
Pcdh15Q99PJ1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pcdh15Q99PJ1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pcdh15Q99PJ1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.91■■■□□ 2.22
Pcdh15Q99PJ1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pcdh15Q99PJ1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Pcdh15Q99PJ1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Pcdh15Q99PJ1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Pcdh15Q99PJ1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.89■■■□□ 2.22
Pcdh15Q99PJ1 Gm6311-201ENSMUST00000073790 878 ntBASIC28.89■■■□□ 2.22
Pcdh15Q99PJ1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.88■■■□□ 2.21
Pcdh15Q99PJ1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.87■■■□□ 2.21
Pcdh15Q99PJ1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdh15Q99PJ1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.85■■■□□ 2.21
Pcdh15Q99PJ1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdh15Q99PJ1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.84■■■□□ 2.21
Pcdh15Q99PJ1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pcdh15Q99PJ1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdh15Q99PJ1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdh15Q99PJ1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdh15Q99PJ1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdh15Q99PJ1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Pcdh15Q99PJ1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdh15Q99PJ1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdh15Q99PJ1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdh15Q99PJ1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Pcdh15Q99PJ1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.79■■■□□ 2.2
Pcdh15Q99PJ1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdh15Q99PJ1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdh15Q99PJ1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdh15Q99PJ1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Pcdh15Q99PJ1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.79■■■□□ 2.2
Pcdh15Q99PJ1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdh15Q99PJ1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdh15Q99PJ1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Pcdh15Q99PJ1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdh15Q99PJ1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdh15Q99PJ1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdh15Q99PJ1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
Pcdh15Q99PJ1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Pcdh15Q99PJ1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Pcdh15Q99PJ1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Pcdh15Q99PJ1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pcdh15Q99PJ1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pcdh15Q99PJ1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdh15Q99PJ1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdh15Q99PJ1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdh15Q99PJ1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.69■■■□□ 2.18
Pcdh15Q99PJ1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdh15Q99PJ1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdh15Q99PJ1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdh15Q99PJ1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Pcdh15Q99PJ1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Pcdh15Q99PJ1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdh15Q99PJ1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdh15Q99PJ1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pcdh15Q99PJ1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Pcdh15Q99PJ1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Pcdh15Q99PJ1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pcdh15Q99PJ1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
Pcdh15Q99PJ1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pcdh15Q99PJ1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdh15Q99PJ1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdh15Q99PJ1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdh15Q99PJ1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdh15Q99PJ1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdh15Q99PJ1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdh15Q99PJ1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdh15Q99PJ1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Pcdh15Q99PJ1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdh15Q99PJ1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdh15Q99PJ1 Particl-201ENSMUST00000205370 1560 ntBASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms