Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
StrcQ8VIM6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
StrcQ8VIM6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
StrcQ8VIM6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
StrcQ8VIM6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
StrcQ8VIM6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.66■■■□□ 2.5
StrcQ8VIM6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
StrcQ8VIM6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.63■■■□□ 2.49
StrcQ8VIM6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
StrcQ8VIM6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.61■■■□□ 2.49
StrcQ8VIM6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.59■■■□□ 2.49
StrcQ8VIM6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
StrcQ8VIM6 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.58■■■□□ 2.49
StrcQ8VIM6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
StrcQ8VIM6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.56■■■□□ 2.48
StrcQ8VIM6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
StrcQ8VIM6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
StrcQ8VIM6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
StrcQ8VIM6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
StrcQ8VIM6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
StrcQ8VIM6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
StrcQ8VIM6 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.48■■■□□ 2.47
StrcQ8VIM6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
StrcQ8VIM6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.47■■■□□ 2.47
StrcQ8VIM6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
StrcQ8VIM6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.46■■■□□ 2.47
StrcQ8VIM6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
StrcQ8VIM6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.45■■■□□ 2.47
StrcQ8VIM6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
StrcQ8VIM6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
StrcQ8VIM6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.44■■■□□ 2.46
StrcQ8VIM6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
StrcQ8VIM6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
StrcQ8VIM6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
StrcQ8VIM6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
StrcQ8VIM6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
StrcQ8VIM6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
StrcQ8VIM6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.4■■■□□ 2.46
StrcQ8VIM6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
StrcQ8VIM6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
StrcQ8VIM6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.4■■■□□ 2.46
StrcQ8VIM6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.4■■■□□ 2.46
StrcQ8VIM6 Gm6311-201ENSMUST00000073790 878 ntBASIC30.39■■■□□ 2.46
StrcQ8VIM6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
StrcQ8VIM6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
StrcQ8VIM6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
StrcQ8VIM6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
StrcQ8VIM6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
StrcQ8VIM6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.36■■■□□ 2.45
StrcQ8VIM6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
StrcQ8VIM6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
StrcQ8VIM6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.33■■■□□ 2.45
StrcQ8VIM6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
StrcQ8VIM6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
StrcQ8VIM6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
StrcQ8VIM6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
StrcQ8VIM6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
StrcQ8VIM6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
StrcQ8VIM6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
StrcQ8VIM6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
StrcQ8VIM6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
StrcQ8VIM6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
StrcQ8VIM6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
StrcQ8VIM6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
StrcQ8VIM6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.29■■■□□ 2.44
StrcQ8VIM6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
StrcQ8VIM6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
StrcQ8VIM6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
StrcQ8VIM6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.28■■■□□ 2.44
StrcQ8VIM6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
StrcQ8VIM6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
StrcQ8VIM6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
StrcQ8VIM6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.26■■■□□ 2.43
StrcQ8VIM6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
StrcQ8VIM6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
StrcQ8VIM6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
StrcQ8VIM6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
StrcQ8VIM6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
StrcQ8VIM6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
StrcQ8VIM6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
StrcQ8VIM6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
StrcQ8VIM6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
StrcQ8VIM6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
StrcQ8VIM6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
StrcQ8VIM6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
StrcQ8VIM6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
StrcQ8VIM6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
StrcQ8VIM6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
StrcQ8VIM6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
StrcQ8VIM6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
StrcQ8VIM6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
StrcQ8VIM6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
StrcQ8VIM6 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.15■■■□□ 2.42
StrcQ8VIM6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
StrcQ8VIM6 Particl-201ENSMUST00000205370 1560 ntBASIC30.14■■■□□ 2.42
StrcQ8VIM6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
StrcQ8VIM6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
StrcQ8VIM6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
StrcQ8VIM6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
StrcQ8VIM6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms