Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.73■■□□□ 1.87
Lmcd1Q8VEE1 Gm15039-201ENSMUST00000118914 875 ntBASIC26.72■■□□□ 1.87
Lmcd1Q8VEE1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Lmcd1Q8VEE1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Lmcd1Q8VEE1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Lmcd1Q8VEE1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Lmcd1Q8VEE1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Lmcd1Q8VEE1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Lmcd1Q8VEE1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.69■■□□□ 1.86
Lmcd1Q8VEE1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Lmcd1Q8VEE1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lmcd1Q8VEE1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lmcd1Q8VEE1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lmcd1Q8VEE1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Lmcd1Q8VEE1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Lmcd1Q8VEE1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lmcd1Q8VEE1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lmcd1Q8VEE1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lmcd1Q8VEE1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.64■■□□□ 1.86
Lmcd1Q8VEE1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.64■■□□□ 1.86
Lmcd1Q8VEE1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Lmcd1Q8VEE1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Lmcd1Q8VEE1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Lmcd1Q8VEE1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Lmcd1Q8VEE1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Lmcd1Q8VEE1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Lmcd1Q8VEE1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Lmcd1Q8VEE1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Lmcd1Q8VEE1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Lmcd1Q8VEE1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Lmcd1Q8VEE1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Lmcd1Q8VEE1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.6■■□□□ 1.85
Lmcd1Q8VEE1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.6■■□□□ 1.85
Lmcd1Q8VEE1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Lmcd1Q8VEE1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Lmcd1Q8VEE1 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.59■■□□□ 1.85
Lmcd1Q8VEE1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Lmcd1Q8VEE1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.58■■□□□ 1.85
Lmcd1Q8VEE1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Lmcd1Q8VEE1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Lmcd1Q8VEE1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Lmcd1Q8VEE1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.56■■□□□ 1.84
Lmcd1Q8VEE1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Lmcd1Q8VEE1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Lmcd1Q8VEE1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
Lmcd1Q8VEE1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Lmcd1Q8VEE1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.54■■□□□ 1.84
Lmcd1Q8VEE1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.54■■□□□ 1.84
Lmcd1Q8VEE1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lmcd1Q8VEE1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.49■■□□□ 1.83
Lmcd1Q8VEE1 Gm12366-201ENSMUST00000121722 873 ntBASIC26.49■■□□□ 1.83
Lmcd1Q8VEE1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.49■■□□□ 1.83
Lmcd1Q8VEE1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.49■■□□□ 1.83
Lmcd1Q8VEE1 Gm5786-201ENSMUST00000085368 882 ntBASIC26.49■■□□□ 1.83
Lmcd1Q8VEE1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.47■■□□□ 1.83
Lmcd1Q8VEE1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lmcd1Q8VEE1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lmcd1Q8VEE1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.46■■□□□ 1.83
Lmcd1Q8VEE1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Lmcd1Q8VEE1 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.44■■□□□ 1.82
Lmcd1Q8VEE1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Lmcd1Q8VEE1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Lmcd1Q8VEE1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Lmcd1Q8VEE1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.43■■□□□ 1.82
Lmcd1Q8VEE1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lmcd1Q8VEE1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lmcd1Q8VEE1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.42■■□□□ 1.82
Lmcd1Q8VEE1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Lmcd1Q8VEE1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lmcd1Q8VEE1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lmcd1Q8VEE1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lmcd1Q8VEE1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Lmcd1Q8VEE1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Lmcd1Q8VEE1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Lmcd1Q8VEE1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lmcd1Q8VEE1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Lmcd1Q8VEE1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lmcd1Q8VEE1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lmcd1Q8VEE1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lmcd1Q8VEE1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lmcd1Q8VEE1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lmcd1Q8VEE1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Lmcd1Q8VEE1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Lmcd1Q8VEE1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lmcd1Q8VEE1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lmcd1Q8VEE1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lmcd1Q8VEE1 Gm11687-201ENSMUST00000118911 886 ntBASIC26.34■■□□□ 1.81
Lmcd1Q8VEE1 Scarna2-201ENSMUST00000157560 414 ntBASIC26.34■■□□□ 1.81
Lmcd1Q8VEE1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lmcd1Q8VEE1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lmcd1Q8VEE1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Lmcd1Q8VEE1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Lmcd1Q8VEE1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Lmcd1Q8VEE1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
Lmcd1Q8VEE1 Particl-201ENSMUST00000205370 1560 ntBASIC26.32■■□□□ 1.8
Lmcd1Q8VEE1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lmcd1Q8VEE1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Lmcd1Q8VEE1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.3■■□□□ 1.8
Lmcd1Q8VEE1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lmcd1Q8VEE1 Gm9806-201ENSMUST00000051080 552 ntBASIC26.3■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms