Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Tmc1Q8R4P5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Tmc1Q8R4P5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Tmc1Q8R4P5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Tmc1Q8R4P5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Tmc1Q8R4P5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Tmc1Q8R4P5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.83■■■□□ 2.37
Tmc1Q8R4P5 Peli2-204ENSMUST00000226513 1320 ntBASIC29.83■■■□□ 2.37
Tmc1Q8R4P5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.81■■■□□ 2.36
Tmc1Q8R4P5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Tmc1Q8R4P5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Tmc1Q8R4P5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Tmc1Q8R4P5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.8■■■□□ 2.36
Tmc1Q8R4P5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Tmc1Q8R4P5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Tmc1Q8R4P5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Tmc1Q8R4P5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Tmc1Q8R4P5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Tmc1Q8R4P5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Tmc1Q8R4P5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.76■■■□□ 2.35
Tmc1Q8R4P5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Tmc1Q8R4P5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Tmc1Q8R4P5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Tmc1Q8R4P5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
Tmc1Q8R4P5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Tmc1Q8R4P5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.73■■■□□ 2.35
Tmc1Q8R4P5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tmc1Q8R4P5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tmc1Q8R4P5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.72■■■□□ 2.35
Tmc1Q8R4P5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Tmc1Q8R4P5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.7■■■□□ 2.35
Tmc1Q8R4P5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Tmc1Q8R4P5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Tmc1Q8R4P5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC29.67■■■□□ 2.34
Tmc1Q8R4P5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Tmc1Q8R4P5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Tmc1Q8R4P5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
Tmc1Q8R4P5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Tmc1Q8R4P5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Tmc1Q8R4P5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Tmc1Q8R4P5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.62■■■□□ 2.33
Tmc1Q8R4P5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Tmc1Q8R4P5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Tmc1Q8R4P5 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.6■■■□□ 2.33
Tmc1Q8R4P5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
Tmc1Q8R4P5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.6■■■□□ 2.33
Tmc1Q8R4P5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Tmc1Q8R4P5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
Tmc1Q8R4P5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Tmc1Q8R4P5 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.57■■■□□ 2.32
Tmc1Q8R4P5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Tmc1Q8R4P5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Tmc1Q8R4P5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Tmc1Q8R4P5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Tmc1Q8R4P5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Tmc1Q8R4P5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.53■■■□□ 2.32
Tmc1Q8R4P5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Tmc1Q8R4P5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Tmc1Q8R4P5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Tmc1Q8R4P5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Tmc1Q8R4P5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Tmc1Q8R4P5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
Tmc1Q8R4P5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Tmc1Q8R4P5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Tmc1Q8R4P5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Tmc1Q8R4P5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Tmc1Q8R4P5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Tmc1Q8R4P5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Tmc1Q8R4P5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Tmc1Q8R4P5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.48■■■□□ 2.31
Tmc1Q8R4P5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Tmc1Q8R4P5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
Tmc1Q8R4P5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Tmc1Q8R4P5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Tmc1Q8R4P5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Tmc1Q8R4P5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Tmc1Q8R4P5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Tmc1Q8R4P5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Tmc1Q8R4P5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Tmc1Q8R4P5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.42■■■□□ 2.3
Tmc1Q8R4P5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Tmc1Q8R4P5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Tmc1Q8R4P5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Tmc1Q8R4P5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Tmc1Q8R4P5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Tmc1Q8R4P5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
Tmc1Q8R4P5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Tmc1Q8R4P5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Tmc1Q8R4P5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Tmc1Q8R4P5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Tmc1Q8R4P5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Tmc1Q8R4P5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Tmc1Q8R4P5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Tmc1Q8R4P5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Tmc1Q8R4P5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Tmc1Q8R4P5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Tmc1Q8R4P5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.34■■■□□ 2.29
Tmc1Q8R4P5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.34■■■□□ 2.29
Tmc1Q8R4P5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Tmc1Q8R4P5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms