Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Cdt1Q8R4E9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Cdt1Q8R4E9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdt1Q8R4E9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdt1Q8R4E9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdt1Q8R4E9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdt1Q8R4E9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdt1Q8R4E9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.44■■□□□ 1.34
Cdt1Q8R4E9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cdt1Q8R4E9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.42■■□□□ 1.34
Cdt1Q8R4E9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.42■■□□□ 1.34
Cdt1Q8R4E9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cdt1Q8R4E9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cdt1Q8R4E9 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.41■■□□□ 1.34
Cdt1Q8R4E9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cdt1Q8R4E9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdt1Q8R4E9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdt1Q8R4E9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdt1Q8R4E9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.39■■□□□ 1.34
Cdt1Q8R4E9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Cdt1Q8R4E9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.39■■□□□ 1.33
Cdt1Q8R4E9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdt1Q8R4E9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.39■■□□□ 1.33
Cdt1Q8R4E9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdt1Q8R4E9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdt1Q8R4E9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Cdt1Q8R4E9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cdt1Q8R4E9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.38■■□□□ 1.33
Cdt1Q8R4E9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cdt1Q8R4E9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdt1Q8R4E9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdt1Q8R4E9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdt1Q8R4E9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdt1Q8R4E9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Cdt1Q8R4E9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Cdt1Q8R4E9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cdt1Q8R4E9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cdt1Q8R4E9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cdt1Q8R4E9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
Cdt1Q8R4E9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cdt1Q8R4E9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cdt1Q8R4E9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdt1Q8R4E9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cdt1Q8R4E9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdt1Q8R4E9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdt1Q8R4E9 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.31■■□□□ 1.32
Cdt1Q8R4E9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdt1Q8R4E9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdt1Q8R4E9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cdt1Q8R4E9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.3■■□□□ 1.32
Cdt1Q8R4E9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdt1Q8R4E9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdt1Q8R4E9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.3■■□□□ 1.32
Cdt1Q8R4E9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cdt1Q8R4E9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdt1Q8R4E9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.28■■□□□ 1.32
Cdt1Q8R4E9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdt1Q8R4E9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdt1Q8R4E9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdt1Q8R4E9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdt1Q8R4E9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.25■■□□□ 1.31
Cdt1Q8R4E9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Cdt1Q8R4E9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cdt1Q8R4E9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdt1Q8R4E9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdt1Q8R4E9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdt1Q8R4E9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdt1Q8R4E9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdt1Q8R4E9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdt1Q8R4E9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdt1Q8R4E9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.22■■□□□ 1.31
Cdt1Q8R4E9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdt1Q8R4E9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.2■■□□□ 1.3
Cdt1Q8R4E9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdt1Q8R4E9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cdt1Q8R4E9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.18■■□□□ 1.3
Cdt1Q8R4E9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Cdt1Q8R4E9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdt1Q8R4E9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdt1Q8R4E9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.17■■□□□ 1.3
Cdt1Q8R4E9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Cdt1Q8R4E9 Nkain2-201ENSMUST00000092602 558 ntBASIC23.17■■□□□ 1.3
Cdt1Q8R4E9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdt1Q8R4E9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdt1Q8R4E9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cdt1Q8R4E9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Cdt1Q8R4E9 Gm7432-201ENSMUST00000210343 879 ntBASIC23.16■■□□□ 1.3
Cdt1Q8R4E9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Cdt1Q8R4E9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdt1Q8R4E9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdt1Q8R4E9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdt1Q8R4E9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdt1Q8R4E9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdt1Q8R4E9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms