Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Cacnb1Q8R3Z5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cacnb1Q8R3Z5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cacnb1Q8R3Z5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cacnb1Q8R3Z5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.92
Cacnb1Q8R3Z5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cacnb1Q8R3Z5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cacnb1Q8R3Z5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cacnb1Q8R3Z5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Cacnb1Q8R3Z5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Cacnb1Q8R3Z5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Cacnb1Q8R3Z5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cacnb1Q8R3Z5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.05■■□□□ 1.92
Cacnb1Q8R3Z5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cacnb1Q8R3Z5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cacnb1Q8R3Z5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cacnb1Q8R3Z5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.02■■□□□ 1.92
Cacnb1Q8R3Z5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cacnb1Q8R3Z5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27■■□□□ 1.91
Cacnb1Q8R3Z5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Cacnb1Q8R3Z5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27■■□□□ 1.91
Cacnb1Q8R3Z5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Cacnb1Q8R3Z5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27■■□□□ 1.91
Cacnb1Q8R3Z5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Cacnb1Q8R3Z5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.99■■□□□ 1.91
Cacnb1Q8R3Z5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cacnb1Q8R3Z5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.98■■□□□ 1.91
Cacnb1Q8R3Z5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
Cacnb1Q8R3Z5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cacnb1Q8R3Z5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cacnb1Q8R3Z5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cacnb1Q8R3Z5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
Cacnb1Q8R3Z5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cacnb1Q8R3Z5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.94■■□□□ 1.9
Cacnb1Q8R3Z5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cacnb1Q8R3Z5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cacnb1Q8R3Z5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cacnb1Q8R3Z5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Cacnb1Q8R3Z5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.92■■□□□ 1.9
Cacnb1Q8R3Z5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cacnb1Q8R3Z5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.91■■□□□ 1.9
Cacnb1Q8R3Z5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.9■■□□□ 1.9
Cacnb1Q8R3Z5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cacnb1Q8R3Z5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Cacnb1Q8R3Z5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Cacnb1Q8R3Z5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cacnb1Q8R3Z5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cacnb1Q8R3Z5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cacnb1Q8R3Z5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cacnb1Q8R3Z5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cacnb1Q8R3Z5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cacnb1Q8R3Z5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cacnb1Q8R3Z5 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.82■■□□□ 1.88
Cacnb1Q8R3Z5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.82■■□□□ 1.88
Cacnb1Q8R3Z5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cacnb1Q8R3Z5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.81■■□□□ 1.88
Cacnb1Q8R3Z5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Cacnb1Q8R3Z5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cacnb1Q8R3Z5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.8■■□□□ 1.88
Cacnb1Q8R3Z5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Cacnb1Q8R3Z5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
Cacnb1Q8R3Z5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
Cacnb1Q8R3Z5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Cacnb1Q8R3Z5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
Cacnb1Q8R3Z5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Cacnb1Q8R3Z5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Cacnb1Q8R3Z5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cacnb1Q8R3Z5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cacnb1Q8R3Z5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.76■■□□□ 1.87
Cacnb1Q8R3Z5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cacnb1Q8R3Z5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.74■■□□□ 1.87
Cacnb1Q8R3Z5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cacnb1Q8R3Z5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cacnb1Q8R3Z5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cacnb1Q8R3Z5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cacnb1Q8R3Z5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.71■■□□□ 1.87
Cacnb1Q8R3Z5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cacnb1Q8R3Z5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cacnb1Q8R3Z5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cacnb1Q8R3Z5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cacnb1Q8R3Z5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cacnb1Q8R3Z5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cacnb1Q8R3Z5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Cacnb1Q8R3Z5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cacnb1Q8R3Z5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cacnb1Q8R3Z5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cacnb1Q8R3Z5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cacnb1Q8R3Z5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cacnb1Q8R3Z5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cacnb1Q8R3Z5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cacnb1Q8R3Z5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cacnb1Q8R3Z5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Cacnb1Q8R3Z5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cacnb1Q8R3Z5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cacnb1Q8R3Z5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Cacnb1Q8R3Z5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cacnb1Q8R3Z5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.59■■□□□ 1.85
Cacnb1Q8R3Z5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.59■■□□□ 1.85
Cacnb1Q8R3Z5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cacnb1Q8R3Z5 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms