Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptcd2Q8R3K3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptcd2Q8R3K3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Ptcd2Q8R3K3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.66■■□□□ 1.86
Ptcd2Q8R3K3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptcd2Q8R3K3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.64■■□□□ 1.86
Ptcd2Q8R3K3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.64■■□□□ 1.86
Ptcd2Q8R3K3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.62■■□□□ 1.85
Ptcd2Q8R3K3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Ptcd2Q8R3K3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Ptcd2Q8R3K3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.6■■□□□ 1.85
Ptcd2Q8R3K3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptcd2Q8R3K3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.6■■□□□ 1.85
Ptcd2Q8R3K3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ptcd2Q8R3K3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ptcd2Q8R3K3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd2Q8R3K3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptcd2Q8R3K3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptcd2Q8R3K3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptcd2Q8R3K3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.56■■□□□ 1.84
Ptcd2Q8R3K3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd2Q8R3K3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptcd2Q8R3K3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.54■■□□□ 1.84
Ptcd2Q8R3K3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptcd2Q8R3K3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.53■■□□□ 1.84
Ptcd2Q8R3K3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptcd2Q8R3K3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd2Q8R3K3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.52■■□□□ 1.84
Ptcd2Q8R3K3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd2Q8R3K3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd2Q8R3K3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd2Q8R3K3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ptcd2Q8R3K3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.5■■□□□ 1.83
Ptcd2Q8R3K3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Ptcd2Q8R3K3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.49■■□□□ 1.83
Ptcd2Q8R3K3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptcd2Q8R3K3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptcd2Q8R3K3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd2Q8R3K3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Gm11687-201ENSMUST00000118911 886 ntBASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.47■■□□□ 1.83
Ptcd2Q8R3K3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd2Q8R3K3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ptcd2Q8R3K3 Scarna2-201ENSMUST00000157560 414 ntBASIC26.44■■□□□ 1.82
Ptcd2Q8R3K3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ptcd2Q8R3K3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.44■■□□□ 1.82
Ptcd2Q8R3K3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ptcd2Q8R3K3 Gm7332-201ENSMUST00000118351 454 ntBASIC26.43■■□□□ 1.82
Ptcd2Q8R3K3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Ptcd2Q8R3K3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Gm5812-201ENSMUST00000061073 957 ntBASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd2Q8R3K3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Gm9806-201ENSMUST00000051080 552 ntBASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.4■■□□□ 1.82
Ptcd2Q8R3K3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ptcd2Q8R3K3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ptcd2Q8R3K3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.38■■□□□ 1.81
Ptcd2Q8R3K3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Gm4799-201ENSMUST00000095396 657 ntBASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.37■■□□□ 1.81
Ptcd2Q8R3K3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ptcd2Q8R3K3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ptcd2Q8R3K3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ptcd2Q8R3K3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd2Q8R3K3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ptcd2Q8R3K3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ptcd2Q8R3K3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd2Q8R3K3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd2Q8R3K3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd2Q8R3K3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.31■■□□□ 1.8
Ptcd2Q8R3K3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd2Q8R3K3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptcd2Q8R3K3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.26■■□□□ 1.79
Ptcd2Q8R3K3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd2Q8R3K3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Gm16437-201ENSMUST00000025669 507 ntBASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd2Q8R3K3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms