Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb4Q8R0S4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb4Q8R0S4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb4Q8R0S4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb4Q8R0S4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb4Q8R0S4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb4Q8R0S4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cacnb4Q8R0S4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.59■■□□□ 1.05
Cacnb4Q8R0S4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb4Q8R0S4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacnb4Q8R0S4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cacnb4Q8R0S4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacnb4Q8R0S4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacnb4Q8R0S4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacnb4Q8R0S4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cacnb4Q8R0S4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb4Q8R0S4 Gm16148-201ENSMUST00000119653 893 ntBASIC21.57■■□□□ 1.04
Cacnb4Q8R0S4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Cacnb4Q8R0S4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.57■■□□□ 1.04
Cacnb4Q8R0S4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacnb4Q8R0S4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cacnb4Q8R0S4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacnb4Q8R0S4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb4Q8R0S4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb4Q8R0S4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb4Q8R0S4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb4Q8R0S4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb4Q8R0S4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacnb4Q8R0S4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.53■■□□□ 1.04
Cacnb4Q8R0S4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb4Q8R0S4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Cacnb4Q8R0S4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacnb4Q8R0S4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.52■■□□□ 1.04
Cacnb4Q8R0S4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb4Q8R0S4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb4Q8R0S4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacnb4Q8R0S4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cacnb4Q8R0S4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb4Q8R0S4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb4Q8R0S4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacnb4Q8R0S4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.5■■□□□ 1.03
Cacnb4Q8R0S4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb4Q8R0S4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacnb4Q8R0S4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cacnb4Q8R0S4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacnb4Q8R0S4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cacnb4Q8R0S4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacnb4Q8R0S4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cacnb4Q8R0S4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.48■■□□□ 1.03
Cacnb4Q8R0S4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb4Q8R0S4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacnb4Q8R0S4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb4Q8R0S4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb4Q8R0S4 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.44■■□□□ 1.02
Cacnb4Q8R0S4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb4Q8R0S4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cacnb4Q8R0S4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb4Q8R0S4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb4Q8R0S4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb4Q8R0S4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb4Q8R0S4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb4Q8R0S4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb4Q8R0S4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.39■■□□□ 1.02
Cacnb4Q8R0S4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Cacnb4Q8R0S4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cacnb4Q8R0S4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cacnb4Q8R0S4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb4Q8R0S4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Cacnb4Q8R0S4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb4Q8R0S4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb4Q8R0S4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb4Q8R0S4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb4Q8R0S4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Cacnb4Q8R0S4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb4Q8R0S4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.37■■□□□ 1.01
Cacnb4Q8R0S4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb4Q8R0S4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb4Q8R0S4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.37■■□□□ 1.01
Cacnb4Q8R0S4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.36■■□□□ 1.01
Cacnb4Q8R0S4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb4Q8R0S4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb4Q8R0S4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb4Q8R0S4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb4Q8R0S4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb4Q8R0S4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cacnb4Q8R0S4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb4Q8R0S4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb4Q8R0S4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cacnb4Q8R0S4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cacnb4Q8R0S4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Cacnb4Q8R0S4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cacnb4Q8R0S4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb4Q8R0S4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb4Q8R0S4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms