Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.63■□□□□ 0.89
Lsm11Q8BUV6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lsm11Q8BUV6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm11Q8BUV6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lsm11Q8BUV6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm11Q8BUV6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm11Q8BUV6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm11Q8BUV6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Lsm11Q8BUV6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm11Q8BUV6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm11Q8BUV6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm11Q8BUV6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm11Q8BUV6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Lsm11Q8BUV6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm11Q8BUV6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm11Q8BUV6 Gm26115-201ENSMUST00000175605 87 ntBASIC20.56■□□□□ 0.88
Lsm11Q8BUV6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm11Q8BUV6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm11Q8BUV6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lsm11Q8BUV6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lsm11Q8BUV6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm11Q8BUV6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm11Q8BUV6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lsm11Q8BUV6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm11Q8BUV6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Gm8109-201ENSMUST00000194076 746 ntBASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.53■□□□□ 0.88
Lsm11Q8BUV6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.52■□□□□ 0.88
Lsm11Q8BUV6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm11Q8BUV6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm11Q8BUV6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm11Q8BUV6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm11Q8BUV6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm11Q8BUV6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lsm11Q8BUV6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Lsm11Q8BUV6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm11Q8BUV6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm11Q8BUV6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm11Q8BUV6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm11Q8BUV6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm11Q8BUV6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm11Q8BUV6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm11Q8BUV6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm11Q8BUV6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm11Q8BUV6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.45■□□□□ 0.86
Lsm11Q8BUV6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lsm11Q8BUV6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.44■□□□□ 0.86
Lsm11Q8BUV6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm11Q8BUV6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm11Q8BUV6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm11Q8BUV6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm11Q8BUV6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm11Q8BUV6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm11Q8BUV6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm11Q8BUV6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm11Q8BUV6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm11Q8BUV6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm11Q8BUV6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm11Q8BUV6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Lsm11Q8BUV6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm11Q8BUV6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm11Q8BUV6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm11Q8BUV6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm11Q8BUV6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lsm11Q8BUV6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm11Q8BUV6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm11Q8BUV6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm11Q8BUV6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm11Q8BUV6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm11Q8BUV6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm11Q8BUV6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.34■□□□□ 0.85
Lsm11Q8BUV6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm11Q8BUV6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm11Q8BUV6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm11Q8BUV6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm11Q8BUV6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm11Q8BUV6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Lsm11Q8BUV6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm11Q8BUV6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm11Q8BUV6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lsm11Q8BUV6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.31■□□□□ 0.84
Lsm11Q8BUV6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm11Q8BUV6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm11Q8BUV6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.3■□□□□ 0.84
Lsm11Q8BUV6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm11Q8BUV6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm11Q8BUV6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm11Q8BUV6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm11Q8BUV6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm11Q8BUV6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms