Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.49■■□□□ 1.35
Rnf38Q8BI21 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf38Q8BI21 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf38Q8BI21 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.48■■□□□ 1.35
Rnf38Q8BI21 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf38Q8BI21 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf38Q8BI21 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf38Q8BI21 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf38Q8BI21 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf38Q8BI21 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf38Q8BI21 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf38Q8BI21 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf38Q8BI21 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Gm16148-201ENSMUST00000119653 893 ntBASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Rnf38Q8BI21 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Rnf38Q8BI21 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf38Q8BI21 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf38Q8BI21 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf38Q8BI21 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
Rnf38Q8BI21 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf38Q8BI21 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf38Q8BI21 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf38Q8BI21 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf38Q8BI21 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf38Q8BI21 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.39■■□□□ 1.33
Rnf38Q8BI21 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf38Q8BI21 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf38Q8BI21 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.38■■□□□ 1.33
Rnf38Q8BI21 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf38Q8BI21 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Rnf38Q8BI21 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf38Q8BI21 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf38Q8BI21 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf38Q8BI21 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Rnf38Q8BI21 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf38Q8BI21 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.34■■□□□ 1.33
Rnf38Q8BI21 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.33■■□□□ 1.33
Rnf38Q8BI21 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf38Q8BI21 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf38Q8BI21 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf38Q8BI21 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf38Q8BI21 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf38Q8BI21 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf38Q8BI21 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf38Q8BI21 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf38Q8BI21 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf38Q8BI21 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf38Q8BI21 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf38Q8BI21 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.29■■□□□ 1.32
Rnf38Q8BI21 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf38Q8BI21 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Rnf38Q8BI21 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf38Q8BI21 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf38Q8BI21 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf38Q8BI21 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf38Q8BI21 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf38Q8BI21 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Rnf38Q8BI21 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.26■■□□□ 1.31
Rnf38Q8BI21 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rnf38Q8BI21 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf38Q8BI21 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rnf38Q8BI21 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf38Q8BI21 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf38Q8BI21 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf38Q8BI21 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf38Q8BI21 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf38Q8BI21 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf38Q8BI21 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rnf38Q8BI21 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf38Q8BI21 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf38Q8BI21 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Rnf38Q8BI21 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.22■■□□□ 1.31
Rnf38Q8BI21 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf38Q8BI21 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf38Q8BI21 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf38Q8BI21 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Rnf38Q8BI21 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf38Q8BI21 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf38Q8BI21 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Rnf38Q8BI21 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf38Q8BI21 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf38Q8BI21 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf38Q8BI21 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf38Q8BI21 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf38Q8BI21 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf38Q8BI21 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf38Q8BI21 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf38Q8BI21 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.12■■□□□ 1.29
Rnf38Q8BI21 Zfp131-205ENSMUST00000223812 663 ntBASIC23.12■■□□□ 1.29
Rnf38Q8BI21 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf38Q8BI21 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Rnf38Q8BI21 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.11■■□□□ 1.29
Rnf38Q8BI21 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf38Q8BI21 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf38Q8BI21 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms