Protein–RNA interactions for Protein: Q8BGR9

Ublcp1, Ubiquitin-like domain-containing CTD phosphatase 1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ublcp1Q8BGR9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.46■■□□□ 1.67
Ublcp1Q8BGR9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
Ublcp1Q8BGR9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ublcp1Q8BGR9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ublcp1Q8BGR9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ublcp1Q8BGR9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ublcp1Q8BGR9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ublcp1Q8BGR9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ublcp1Q8BGR9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ublcp1Q8BGR9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ublcp1Q8BGR9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ublcp1Q8BGR9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ublcp1Q8BGR9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ublcp1Q8BGR9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
Ublcp1Q8BGR9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ublcp1Q8BGR9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ublcp1Q8BGR9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ublcp1Q8BGR9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ublcp1Q8BGR9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.36■■□□□ 1.65
Ublcp1Q8BGR9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ublcp1Q8BGR9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Ublcp1Q8BGR9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Ublcp1Q8BGR9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Ublcp1Q8BGR9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ublcp1Q8BGR9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Ublcp1Q8BGR9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ublcp1Q8BGR9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ublcp1Q8BGR9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ublcp1Q8BGR9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Ublcp1Q8BGR9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ublcp1Q8BGR9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Ublcp1Q8BGR9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ublcp1Q8BGR9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ublcp1Q8BGR9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ublcp1Q8BGR9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ublcp1Q8BGR9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ublcp1Q8BGR9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ublcp1Q8BGR9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ublcp1Q8BGR9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Ublcp1Q8BGR9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ublcp1Q8BGR9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.28■■□□□ 1.64
Ublcp1Q8BGR9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Ublcp1Q8BGR9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ublcp1Q8BGR9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ublcp1Q8BGR9 Gm8109-201ENSMUST00000194076 746 ntBASIC25.26■■□□□ 1.63
Ublcp1Q8BGR9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Ublcp1Q8BGR9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ublcp1Q8BGR9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ublcp1Q8BGR9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ublcp1Q8BGR9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.25■■□□□ 1.63
Ublcp1Q8BGR9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ublcp1Q8BGR9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ublcp1Q8BGR9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ublcp1Q8BGR9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ublcp1Q8BGR9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ublcp1Q8BGR9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ublcp1Q8BGR9 Gm26115-201ENSMUST00000175605 87 ntBASIC25.22■■□□□ 1.63
Ublcp1Q8BGR9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Ublcp1Q8BGR9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ublcp1Q8BGR9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.2■■□□□ 1.62
Ublcp1Q8BGR9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ublcp1Q8BGR9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.19■■□□□ 1.62
Ublcp1Q8BGR9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ublcp1Q8BGR9 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.19■■□□□ 1.62
Ublcp1Q8BGR9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ublcp1Q8BGR9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ublcp1Q8BGR9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ublcp1Q8BGR9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ublcp1Q8BGR9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ublcp1Q8BGR9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Ublcp1Q8BGR9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
Ublcp1Q8BGR9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ublcp1Q8BGR9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ublcp1Q8BGR9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.14■■□□□ 1.62
Ublcp1Q8BGR9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ublcp1Q8BGR9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ublcp1Q8BGR9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ublcp1Q8BGR9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ublcp1Q8BGR9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ublcp1Q8BGR9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ublcp1Q8BGR9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ublcp1Q8BGR9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ublcp1Q8BGR9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ublcp1Q8BGR9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ublcp1Q8BGR9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ublcp1Q8BGR9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ublcp1Q8BGR9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ublcp1Q8BGR9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ublcp1Q8BGR9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ublcp1Q8BGR9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ublcp1Q8BGR9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ublcp1Q8BGR9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ublcp1Q8BGR9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ublcp1Q8BGR9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.05■■□□□ 1.6
Ublcp1Q8BGR9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ublcp1Q8BGR9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ublcp1Q8BGR9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ublcp1Q8BGR9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.05■■□□□ 1.6
Ublcp1Q8BGR9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ublcp1Q8BGR9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms