Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc28Q80XJ3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc28Q80XJ3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ttc28Q80XJ3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc28Q80XJ3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc28Q80XJ3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc28Q80XJ3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.16■□□□□ 0.98
Ttc28Q80XJ3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.15■□□□□ 0.98
Ttc28Q80XJ3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc28Q80XJ3 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.14■□□□□ 0.98
Ttc28Q80XJ3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.14■□□□□ 0.97
Ttc28Q80XJ3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc28Q80XJ3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc28Q80XJ3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc28Q80XJ3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.13■□□□□ 0.97
Ttc28Q80XJ3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc28Q80XJ3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc28Q80XJ3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.11■□□□□ 0.97
Ttc28Q80XJ3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc28Q80XJ3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.1■□□□□ 0.97
Ttc28Q80XJ3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc28Q80XJ3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc28Q80XJ3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc28Q80XJ3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ttc28Q80XJ3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.06■□□□□ 0.96
Ttc28Q80XJ3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc28Q80XJ3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc28Q80XJ3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ttc28Q80XJ3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.02■□□□□ 0.96
Ttc28Q80XJ3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc28Q80XJ3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ttc28Q80XJ3 Gm6311-201ENSMUST00000073790 878 ntBASIC21.02■□□□□ 0.96
Ttc28Q80XJ3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc28Q80XJ3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc28Q80XJ3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc28Q80XJ3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc28Q80XJ3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.99■□□□□ 0.95
Ttc28Q80XJ3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.98■□□□□ 0.95
Ttc28Q80XJ3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ttc28Q80XJ3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ttc28Q80XJ3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc28Q80XJ3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.97■□□□□ 0.95
Ttc28Q80XJ3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc28Q80XJ3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc28Q80XJ3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ttc28Q80XJ3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.95■□□□□ 0.94
Ttc28Q80XJ3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc28Q80XJ3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc28Q80XJ3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc28Q80XJ3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc28Q80XJ3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.92■□□□□ 0.94
Ttc28Q80XJ3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc28Q80XJ3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc28Q80XJ3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.91■□□□□ 0.94
Ttc28Q80XJ3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ttc28Q80XJ3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.9■□□□□ 0.94
Ttc28Q80XJ3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc28Q80XJ3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.9■□□□□ 0.94
Ttc28Q80XJ3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc28Q80XJ3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc28Q80XJ3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc28Q80XJ3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc28Q80XJ3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc28Q80XJ3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ttc28Q80XJ3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.86■□□□□ 0.93
Ttc28Q80XJ3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.86■□□□□ 0.93
Ttc28Q80XJ3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc28Q80XJ3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc28Q80XJ3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ttc28Q80XJ3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc28Q80XJ3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc28Q80XJ3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc28Q80XJ3 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.84■□□□□ 0.93
Ttc28Q80XJ3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.84■□□□□ 0.93
Ttc28Q80XJ3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc28Q80XJ3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.84■□□□□ 0.93
Ttc28Q80XJ3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ttc28Q80XJ3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc28Q80XJ3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc28Q80XJ3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ttc28Q80XJ3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ttc28Q80XJ3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc28Q80XJ3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc28Q80XJ3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ttc28Q80XJ3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.82■□□□□ 0.92
Ttc28Q80XJ3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ttc28Q80XJ3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc28Q80XJ3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc28Q80XJ3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc28Q80XJ3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc28Q80XJ3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc28Q80XJ3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc28Q80XJ3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc28Q80XJ3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc28Q80XJ3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc28Q80XJ3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.79■□□□□ 0.92
Ttc28Q80XJ3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ttc28Q80XJ3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc28Q80XJ3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc28Q80XJ3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms