Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim36Q80WG7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.16■■□□□ 1.3
Trim36Q80WG7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Trim36Q80WG7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.15■■□□□ 1.3
Trim36Q80WG7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim36Q80WG7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Trim36Q80WG7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim36Q80WG7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim36Q80WG7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.14■■□□□ 1.29
Trim36Q80WG7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim36Q80WG7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim36Q80WG7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim36Q80WG7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim36Q80WG7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim36Q80WG7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim36Q80WG7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.11■■□□□ 1.29
Trim36Q80WG7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trim36Q80WG7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Trim36Q80WG7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim36Q80WG7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trim36Q80WG7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim36Q80WG7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim36Q80WG7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Trim36Q80WG7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim36Q80WG7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim36Q80WG7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim36Q80WG7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.06■■□□□ 1.28
Trim36Q80WG7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim36Q80WG7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim36Q80WG7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Trim36Q80WG7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Trim36Q80WG7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim36Q80WG7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.04■■□□□ 1.28
Trim36Q80WG7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trim36Q80WG7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim36Q80WG7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Trim36Q80WG7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Trim36Q80WG7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim36Q80WG7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.01■■□□□ 1.27
Trim36Q80WG7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Trim36Q80WG7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim36Q80WG7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23■■□□□ 1.27
Trim36Q80WG7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim36Q80WG7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim36Q80WG7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.97■■□□□ 1.27
Trim36Q80WG7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim36Q80WG7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Trim36Q80WG7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.96■■□□□ 1.27
Trim36Q80WG7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.95■■□□□ 1.26
Trim36Q80WG7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim36Q80WG7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim36Q80WG7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim36Q80WG7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim36Q80WG7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim36Q80WG7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim36Q80WG7 Gm24970-201ENSMUST00000175582 82 ntBASIC22.93■■□□□ 1.26
Trim36Q80WG7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim36Q80WG7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim36Q80WG7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Trim36Q80WG7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim36Q80WG7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Trim36Q80WG7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
Trim36Q80WG7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim36Q80WG7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim36Q80WG7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim36Q80WG7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim36Q80WG7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim36Q80WG7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Trim36Q80WG7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim36Q80WG7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trim36Q80WG7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.85■■□□□ 1.25
Trim36Q80WG7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 150 ms