Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa4Q62425 Gm25262-201ENSMUST00000174934 133 ntBASIC17.53■□□□□ 0.4
Ndufa4Q62425 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa4Q62425 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.53■□□□□ 0.4
Ndufa4Q62425 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ndufa4Q62425 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ndufa4Q62425 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa4Q62425 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa4Q62425 Gm27322-201ENSMUST00000184007 104 ntBASIC17.51■□□□□ 0.39
Ndufa4Q62425 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa4Q62425 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Ndufa4Q62425 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa4Q62425 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ndufa4Q62425 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ndufa4Q62425 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Ndufa4Q62425 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa4Q62425 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa4Q62425 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.47■□□□□ 0.39
Ndufa4Q62425 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa4Q62425 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.47■□□□□ 0.39
Ndufa4Q62425 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.46■□□□□ 0.39
Ndufa4Q62425 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa4Q62425 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
Ndufa4Q62425 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa4Q62425 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa4Q62425 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.45■□□□□ 0.38
Ndufa4Q62425 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ndufa4Q62425 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ndufa4Q62425 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa4Q62425 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.45■□□□□ 0.38
Ndufa4Q62425 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa4Q62425 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufa4Q62425 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ndufa4Q62425 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufa4Q62425 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufa4Q62425 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufa4Q62425 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ndufa4Q62425 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa4Q62425 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa4Q62425 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ndufa4Q62425 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ndufa4Q62425 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ndufa4Q62425 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ndufa4Q62425 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ndufa4Q62425 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ndufa4Q62425 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndufa4Q62425 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ndufa4Q62425 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndufa4Q62425 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.39■□□□□ 0.37
Ndufa4Q62425 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Ndufa4Q62425 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ndufa4Q62425 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ndufa4Q62425 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ndufa4Q62425 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ndufa4Q62425 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ndufa4Q62425 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa4Q62425 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa4Q62425 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa4Q62425 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ndufa4Q62425 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndufa4Q62425 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndufa4Q62425 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa4Q62425 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.35■□□□□ 0.37
Ndufa4Q62425 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa4Q62425 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa4Q62425 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa4Q62425 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa4Q62425 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa4Q62425 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndufa4Q62425 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ndufa4Q62425 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ndufa4Q62425 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ndufa4Q62425 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ndufa4Q62425 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa4Q62425 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa4Q62425 Peli2-204ENSMUST00000226513 1320 ntBASIC17.31■□□□□ 0.36
Ndufa4Q62425 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa4Q62425 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa4Q62425 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndufa4Q62425 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndufa4Q62425 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndufa4Q62425 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndufa4Q62425 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndufa4Q62425 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndufa4Q62425 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndufa4Q62425 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndufa4Q62425 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.27■□□□□ 0.36
Ndufa4Q62425 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndufa4Q62425 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndufa4Q62425 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa4Q62425 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa4Q62425 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.26■□□□□ 0.35
Ndufa4Q62425 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.26■□□□□ 0.35
Ndufa4Q62425 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms