Protein–RNA interactions for Protein: Q5ND52

Mrm3, rRNA methyltransferase 3, mitochondrial, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrm3Q5ND52 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Mrm3Q5ND52 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Mrm3Q5ND52 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Mrm3Q5ND52 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Mrm3Q5ND52 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Mrm3Q5ND52 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Mrm3Q5ND52 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Mrm3Q5ND52 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mrm3Q5ND52 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Mrm3Q5ND52 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.65■■□□□ 1.22
Mrm3Q5ND52 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mrm3Q5ND52 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Mrm3Q5ND52 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
Mrm3Q5ND52 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Mrm3Q5ND52 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Mrm3Q5ND52 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Mrm3Q5ND52 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Mrm3Q5ND52 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Mrm3Q5ND52 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Mrm3Q5ND52 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Mrm3Q5ND52 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.59■■□□□ 1.21
Mrm3Q5ND52 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Mrm3Q5ND52 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Mrm3Q5ND52 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Mrm3Q5ND52 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
Mrm3Q5ND52 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Mrm3Q5ND52 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Mrm3Q5ND52 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mrm3Q5ND52 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mrm3Q5ND52 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Mrm3Q5ND52 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Mrm3Q5ND52 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Mrm3Q5ND52 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Mrm3Q5ND52 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Mrm3Q5ND52 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mrm3Q5ND52 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Mrm3Q5ND52 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Mrm3Q5ND52 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mrm3Q5ND52 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mrm3Q5ND52 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mrm3Q5ND52 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mrm3Q5ND52 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mrm3Q5ND52 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mrm3Q5ND52 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mrm3Q5ND52 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.48■■□□□ 1.19
Mrm3Q5ND52 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Mrm3Q5ND52 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Mrm3Q5ND52 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.45■■□□□ 1.19
Mrm3Q5ND52 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mrm3Q5ND52 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mrm3Q5ND52 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Mrm3Q5ND52 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Mrm3Q5ND52 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mrm3Q5ND52 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.43■■□□□ 1.18
Mrm3Q5ND52 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mrm3Q5ND52 Peli2-204ENSMUST00000226513 1320 ntBASIC22.43■■□□□ 1.18
Mrm3Q5ND52 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mrm3Q5ND52 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mrm3Q5ND52 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Mrm3Q5ND52 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Mrm3Q5ND52 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Mrm3Q5ND52 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Mrm3Q5ND52 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Mrm3Q5ND52 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Mrm3Q5ND52 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Mrm3Q5ND52 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Mrm3Q5ND52 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Mrm3Q5ND52 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Mrm3Q5ND52 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Mrm3Q5ND52 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Mrm3Q5ND52 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Mrm3Q5ND52 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Mrm3Q5ND52 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Mrm3Q5ND52 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Mrm3Q5ND52 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Mrm3Q5ND52 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Mrm3Q5ND52 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Mrm3Q5ND52 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Mrm3Q5ND52 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.35■■□□□ 1.17
Mrm3Q5ND52 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mrm3Q5ND52 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Mrm3Q5ND52 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Mrm3Q5ND52 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.33■■□□□ 1.17
Mrm3Q5ND52 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Mrm3Q5ND52 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Mrm3Q5ND52 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Mrm3Q5ND52 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms