Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl6Q505G4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.65■□□□□ 0.9
Rtl6Q505G4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl6Q505G4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl6Q505G4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtl6Q505G4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtl6Q505G4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtl6Q505G4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl6Q505G4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl6Q505G4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl6Q505G4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtl6Q505G4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtl6Q505G4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl6Q505G4 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.61■□□□□ 0.89
Rtl6Q505G4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.61■□□□□ 0.89
Rtl6Q505G4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl6Q505G4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl6Q505G4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl6Q505G4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl6Q505G4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rtl6Q505G4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl6Q505G4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl6Q505G4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl6Q505G4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl6Q505G4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl6Q505G4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl6Q505G4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.58■□□□□ 0.88
Rtl6Q505G4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl6Q505G4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.57■□□□□ 0.88
Rtl6Q505G4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl6Q505G4 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.55■□□□□ 0.88
Rtl6Q505G4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.55■□□□□ 0.88
Rtl6Q505G4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.54■□□□□ 0.88
Rtl6Q505G4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rtl6Q505G4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rtl6Q505G4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl6Q505G4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtl6Q505G4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl6Q505G4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rtl6Q505G4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl6Q505G4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtl6Q505G4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl6Q505G4 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.51■□□□□ 0.87
Rtl6Q505G4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl6Q505G4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl6Q505G4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl6Q505G4 Gm6821-201ENSMUST00000107540 542 ntBASIC20.49■□□□□ 0.87
Rtl6Q505G4 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.49■□□□□ 0.87
Rtl6Q505G4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl6Q505G4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtl6Q505G4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl6Q505G4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl6Q505G4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.48■□□□□ 0.87
Rtl6Q505G4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl6Q505G4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl6Q505G4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rtl6Q505G4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl6Q505G4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl6Q505G4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl6Q505G4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl6Q505G4 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.46■□□□□ 0.87
Rtl6Q505G4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl6Q505G4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl6Q505G4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl6Q505G4 Gm8503-201ENSMUST00000118131 455 ntBASIC20.43■□□□□ 0.86
Rtl6Q505G4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.43■□□□□ 0.86
Rtl6Q505G4 Nkain2-201ENSMUST00000092602 558 ntBASIC20.43■□□□□ 0.86
Rtl6Q505G4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtl6Q505G4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtl6Q505G4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtl6Q505G4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rtl6Q505G4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl6Q505G4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl6Q505G4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl6Q505G4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl6Q505G4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.4■□□□□ 0.86
Rtl6Q505G4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl6Q505G4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtl6Q505G4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtl6Q505G4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.39■□□□□ 0.85
Rtl6Q505G4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rtl6Q505G4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl6Q505G4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl6Q505G4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rtl6Q505G4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl6Q505G4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Rtl6Q505G4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Rtl6Q505G4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl6Q505G4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl6Q505G4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl6Q505G4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl6Q505G4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl6Q505G4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rtl6Q505G4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms