Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa3Q3UPR0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa3Q3UPR0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa3Q3UPR0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa3Q3UPR0 Peli2-204ENSMUST00000226513 1320 ntBASIC20.97■□□□□ 0.95
Shisa3Q3UPR0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa3Q3UPR0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa3Q3UPR0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa3Q3UPR0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.95■□□□□ 0.94
Shisa3Q3UPR0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Shisa3Q3UPR0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa3Q3UPR0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa3Q3UPR0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa3Q3UPR0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa3Q3UPR0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Shisa3Q3UPR0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Shisa3Q3UPR0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa3Q3UPR0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa3Q3UPR0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa3Q3UPR0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shisa3Q3UPR0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa3Q3UPR0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa3Q3UPR0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shisa3Q3UPR0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa3Q3UPR0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Shisa3Q3UPR0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa3Q3UPR0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Shisa3Q3UPR0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Shisa3Q3UPR0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa3Q3UPR0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa3Q3UPR0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa3Q3UPR0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa3Q3UPR0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa3Q3UPR0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Shisa3Q3UPR0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa3Q3UPR0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.85■□□□□ 0.93
Shisa3Q3UPR0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Shisa3Q3UPR0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shisa3Q3UPR0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa3Q3UPR0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa3Q3UPR0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa3Q3UPR0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa3Q3UPR0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa3Q3UPR0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Shisa3Q3UPR0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa3Q3UPR0 Gm16148-201ENSMUST00000119653 893 ntBASIC20.79■□□□□ 0.92
Shisa3Q3UPR0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa3Q3UPR0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa3Q3UPR0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Shisa3Q3UPR0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa3Q3UPR0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa3Q3UPR0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Shisa3Q3UPR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa3Q3UPR0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa3Q3UPR0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shisa3Q3UPR0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa3Q3UPR0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shisa3Q3UPR0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa3Q3UPR0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa3Q3UPR0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.74■□□□□ 0.91
Shisa3Q3UPR0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa3Q3UPR0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa3Q3UPR0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa3Q3UPR0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Shisa3Q3UPR0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa3Q3UPR0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa3Q3UPR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa3Q3UPR0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa3Q3UPR0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa3Q3UPR0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa3Q3UPR0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shisa3Q3UPR0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shisa3Q3UPR0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shisa3Q3UPR0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa3Q3UPR0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa3Q3UPR0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa3Q3UPR0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Shisa3Q3UPR0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.65■□□□□ 0.9
Shisa3Q3UPR0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shisa3Q3UPR0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa3Q3UPR0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa3Q3UPR0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Shisa3Q3UPR0 Zfp131-205ENSMUST00000223812 663 ntBASIC20.64■□□□□ 0.89
Shisa3Q3UPR0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.64■□□□□ 0.89
Shisa3Q3UPR0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa3Q3UPR0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa3Q3UPR0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa3Q3UPR0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Shisa3Q3UPR0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Shisa3Q3UPR0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa3Q3UPR0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.61■□□□□ 0.89
Shisa3Q3UPR0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa3Q3UPR0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa3Q3UPR0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms