Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks1bP61025 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks1bP61025 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cks1bP61025 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1bP61025 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cks1bP61025 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1bP61025 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17■□□□□ 0.31
Cks1bP61025 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.99■□□□□ 0.31
Cks1bP61025 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cks1bP61025 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.98■□□□□ 0.31
Cks1bP61025 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1bP61025 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1bP61025 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1bP61025 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Cks1bP61025 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1bP61025 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1bP61025 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1bP61025 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1bP61025 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cks1bP61025 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cks1bP61025 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cks1bP61025 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cks1bP61025 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cks1bP61025 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cks1bP61025 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cks1bP61025 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cks1bP61025 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cks1bP61025 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cks1bP61025 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1bP61025 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1bP61025 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1bP61025 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.92■□□□□ 0.3
Cks1bP61025 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1bP61025 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cks1bP61025 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1bP61025 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1bP61025 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1bP61025 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1bP61025 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cks1bP61025 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cks1bP61025 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1bP61025 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1bP61025 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1bP61025 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cks1bP61025 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cks1bP61025 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cks1bP61025 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cks1bP61025 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1bP61025 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1bP61025 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1bP61025 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1bP61025 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cks1bP61025 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cks1bP61025 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.87■□□□□ 0.29
Cks1bP61025 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1bP61025 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1bP61025 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cks1bP61025 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.85■□□□□ 0.29
Cks1bP61025 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cks1bP61025 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cks1bP61025 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cks1bP61025 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cks1bP61025 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cks1bP61025 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cks1bP61025 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cks1bP61025 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.84■□□□□ 0.29
Cks1bP61025 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cks1bP61025 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Cks1bP61025 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cks1bP61025 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.83■□□□□ 0.28
Cks1bP61025 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cks1bP61025 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cks1bP61025 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cks1bP61025 Gm27322-201ENSMUST00000184007 104 ntBASIC16.82■□□□□ 0.28
Cks1bP61025 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.82■□□□□ 0.28
Cks1bP61025 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cks1bP61025 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cks1bP61025 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cks1bP61025 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cks1bP61025 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cks1bP61025 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cks1bP61025 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1bP61025 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1bP61025 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1bP61025 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1bP61025 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1bP61025 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.8■□□□□ 0.28
Cks1bP61025 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.79■□□□□ 0.28
Cks1bP61025 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Cks1bP61025 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks1bP61025 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks1bP61025 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.78■□□□□ 0.28
Cks1bP61025 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cks1bP61025 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cks1bP61025 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cks1bP61025 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cks1bP61025 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks1bP61025 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cks1bP61025 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.76■□□□□ 0.27
Cks1bP61025 Amer2-203ENSMUST00000225247 2662 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms