Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NcanP55066 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NcanP55066 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NcanP55066 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
NcanP55066 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.82■■□□□ 1.88
NcanP55066 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
NcanP55066 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NcanP55066 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
NcanP55066 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
NcanP55066 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.81■■□□□ 1.88
NcanP55066 Gm6311-201ENSMUST00000073790 878 ntBASIC26.81■■□□□ 1.88
NcanP55066 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
NcanP55066 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NcanP55066 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
NcanP55066 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.8■■□□□ 1.88
NcanP55066 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NcanP55066 Gm22567-201ENSMUST00000175542 342 ntBASIC26.79■■□□□ 1.88
NcanP55066 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.78■■□□□ 1.88
NcanP55066 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NcanP55066 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
NcanP55066 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NcanP55066 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.76■■□□□ 1.87
NcanP55066 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NcanP55066 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NcanP55066 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NcanP55066 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
NcanP55066 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NcanP55066 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.71■■□□□ 1.87
NcanP55066 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NcanP55066 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.7■■□□□ 1.86
NcanP55066 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.7■■□□□ 1.86
NcanP55066 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
NcanP55066 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NcanP55066 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.69■■□□□ 1.86
NcanP55066 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.69■■□□□ 1.86
NcanP55066 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
NcanP55066 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NcanP55066 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.67■■□□□ 1.86
NcanP55066 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NcanP55066 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NcanP55066 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NcanP55066 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
NcanP55066 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
NcanP55066 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NcanP55066 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NcanP55066 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NcanP55066 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NcanP55066 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.65■■□□□ 1.86
NcanP55066 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
NcanP55066 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
NcanP55066 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NcanP55066 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.63■■□□□ 1.85
NcanP55066 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NcanP55066 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NcanP55066 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NcanP55066 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.62■■□□□ 1.85
NcanP55066 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NcanP55066 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.6■■□□□ 1.85
NcanP55066 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NcanP55066 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NcanP55066 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NcanP55066 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.56■■□□□ 1.84
NcanP55066 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.56■■□□□ 1.84
NcanP55066 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NcanP55066 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NcanP55066 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NcanP55066 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NcanP55066 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NcanP55066 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NcanP55066 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NcanP55066 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NcanP55066 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
NcanP55066 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NcanP55066 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
NcanP55066 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.46■■□□□ 1.83
NcanP55066 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
NcanP55066 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NcanP55066 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NcanP55066 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NcanP55066 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.45■■□□□ 1.82
NcanP55066 Gm12366-201ENSMUST00000121722 873 ntBASIC26.45■■□□□ 1.82
NcanP55066 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.45■■□□□ 1.82
NcanP55066 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
NcanP55066 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.45■■□□□ 1.82
NcanP55066 Gm5786-201ENSMUST00000085368 882 ntBASIC26.45■■□□□ 1.82
NcanP55066 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NcanP55066 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NcanP55066 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NcanP55066 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NcanP55066 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NcanP55066 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NcanP55066 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NcanP55066 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NcanP55066 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NcanP55066 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NcanP55066 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NcanP55066 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.4■■□□□ 1.82
NcanP55066 Scarna2-201ENSMUST00000157560 414 ntBASIC26.4■■□□□ 1.82
NcanP55066 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NcanP55066 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms