Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rom1P32958 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rom1P32958 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rom1P32958 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rom1P32958 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rom1P32958 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rom1P32958 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rom1P32958 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rom1P32958 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Rom1P32958 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rom1P32958 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rom1P32958 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.14■□□□□ 0.65
Rom1P32958 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rom1P32958 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.13■□□□□ 0.65
Rom1P32958 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rom1P32958 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rom1P32958 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rom1P32958 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rom1P32958 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rom1P32958 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rom1P32958 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rom1P32958 Gm27322-201ENSMUST00000184007 104 ntBASIC19.1■□□□□ 0.65
Rom1P32958 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rom1P32958 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rom1P32958 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Rom1P32958 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rom1P32958 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Rom1P32958 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rom1P32958 Gm25262-201ENSMUST00000174934 133 ntBASIC19.08■□□□□ 0.64
Rom1P32958 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rom1P32958 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rom1P32958 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rom1P32958 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Rom1P32958 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rom1P32958 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.06■□□□□ 0.64
Rom1P32958 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Rom1P32958 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rom1P32958 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.06■□□□□ 0.64
Rom1P32958 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rom1P32958 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rom1P32958 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rom1P32958 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rom1P32958 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Rom1P32958 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rom1P32958 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.03■□□□□ 0.64
Rom1P32958 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rom1P32958 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rom1P32958 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rom1P32958 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Rom1P32958 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rom1P32958 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rom1P32958 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rom1P32958 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rom1P32958 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rom1P32958 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rom1P32958 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rom1P32958 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rom1P32958 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rom1P32958 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rom1P32958 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rom1P32958 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rom1P32958 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rom1P32958 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rom1P32958 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rom1P32958 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rom1P32958 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rom1P32958 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rom1P32958 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rom1P32958 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.91■□□□□ 0.62
Rom1P32958 Peli2-204ENSMUST00000226513 1320 ntBASIC18.91■□□□□ 0.62
Rom1P32958 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rom1P32958 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.9■□□□□ 0.62
Rom1P32958 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rom1P32958 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rom1P32958 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rom1P32958 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.89■□□□□ 0.61
Rom1P32958 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.88■□□□□ 0.61
Rom1P32958 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rom1P32958 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rom1P32958 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rom1P32958 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rom1P32958 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rom1P32958 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rom1P32958 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rom1P32958 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rom1P32958 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rom1P32958 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rom1P32958 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms