Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01788 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01788 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P01788 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
P01788 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P01788 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01788 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01788 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P01788 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
P01788 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
P01788 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01788 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01788 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
P01788 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01788 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
P01788 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01788 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.07■□□□□ 0.64
P01788 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01788 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
P01788 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01788 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.03■□□□□ 0.64
P01788 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01788 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01788 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.02■□□□□ 0.64
P01788 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
P01788 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.02■□□□□ 0.63
P01788 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01788 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
P01788 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01788 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01788 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01788 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.01■□□□□ 0.63
P01788 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
P01788 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01788 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
P01788 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01788 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01788 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
P01788 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.99■□□□□ 0.63
P01788 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01788 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01788 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01788 Gm24804-201ENSMUST00000174982 85 ntBASIC18.97■□□□□ 0.63
P01788 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
P01788 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
P01788 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
P01788 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01788 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01788 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
P01788 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
P01788 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P01788 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01788 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01788 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Gm16148-201ENSMUST00000119653 893 ntBASIC18.91■□□□□ 0.62
P01788 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01788 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01788 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01788 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.89■□□□□ 0.61
P01788 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.88■□□□□ 0.61
P01788 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01788 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P01788 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
P01788 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01788 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01788 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
P01788 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01788 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01788 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.86■□□□□ 0.61
P01788 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01788 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01788 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01788 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01788 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01788 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01788 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
P01788 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms