Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Tnnt1O88346 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Tnnt1O88346 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.38■■■□□ 2.61
Tnnt1O88346 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.38■■■□□ 2.61
Tnnt1O88346 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tnnt1O88346 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Tnnt1O88346 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tnnt1O88346 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Tnnt1O88346 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.35■■■□□ 2.61
Tnnt1O88346 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tnnt1O88346 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.34■■■□□ 2.61
Tnnt1O88346 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.34■■■□□ 2.61
Tnnt1O88346 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Tnnt1O88346 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tnnt1O88346 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Tnnt1O88346 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
Tnnt1O88346 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.29■■■□□ 2.6
Tnnt1O88346 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Tnnt1O88346 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Tnnt1O88346 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tnnt1O88346 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
Tnnt1O88346 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Tnnt1O88346 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Tnnt1O88346 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Tnnt1O88346 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tnnt1O88346 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tnnt1O88346 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Tnnt1O88346 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tnnt1O88346 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Tnnt1O88346 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Tnnt1O88346 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.2■■■□□ 2.58
Tnnt1O88346 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.19■■■□□ 2.58
Tnnt1O88346 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.19■■■□□ 2.58
Tnnt1O88346 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Tnnt1O88346 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.18■■■□□ 2.58
Tnnt1O88346 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Tnnt1O88346 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tnnt1O88346 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.16■■■□□ 2.58
Tnnt1O88346 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Tnnt1O88346 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.14■■■□□ 2.58
Tnnt1O88346 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Tnnt1O88346 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tnnt1O88346 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tnnt1O88346 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Tnnt1O88346 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.12■■■□□ 2.57
Tnnt1O88346 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Tnnt1O88346 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Tnnt1O88346 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tnnt1O88346 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tnnt1O88346 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tnnt1O88346 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Tnnt1O88346 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
Tnnt1O88346 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Tnnt1O88346 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tnnt1O88346 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tnnt1O88346 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tnnt1O88346 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Tnnt1O88346 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tnnt1O88346 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tnnt1O88346 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.03■■■□□ 2.56
Tnnt1O88346 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.02■■■□□ 2.56
Tnnt1O88346 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Tnnt1O88346 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.01■■■□□ 2.56
Tnnt1O88346 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tnnt1O88346 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
Tnnt1O88346 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Tnnt1O88346 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31■■■□□ 2.55
Tnnt1O88346 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31■■■□□ 2.55
Tnnt1O88346 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Tnnt1O88346 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.99■■■□□ 2.55
Tnnt1O88346 Zxda-201ENSMUST00000117281 2621 ntBASIC30.99■■■□□ 2.55
Tnnt1O88346 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Tnnt1O88346 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Tnnt1O88346 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tnnt1O88346 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Tnnt1O88346 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tnnt1O88346 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tnnt1O88346 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Tnnt1O88346 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tnnt1O88346 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tnnt1O88346 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tnnt1O88346 Gm7432-201ENSMUST00000210343 879 ntBASIC30.95■■■□□ 2.55
Tnnt1O88346 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Tnnt1O88346 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Tnnt1O88346 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Tnnt1O88346 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Tnnt1O88346 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Tnnt1O88346 Gm30023-201ENSMUST00000197970 889 ntBASIC30.9■■■□□ 2.54
Tnnt1O88346 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Tnnt1O88346 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.9■■■□□ 2.54
Tnnt1O88346 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Tnnt1O88346 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.88■■■□□ 2.53
Tnnt1O88346 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Tnnt1O88346 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.87■■■□□ 2.53
Tnnt1O88346 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.86■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms